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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S104.g03275.01.t

Possible name(s)

Phmamm.CG.MTP2014.S104.g03275

Gene model

Phmamm.CG.MTP2014.S104.g03275

Location

S104 [152,756 / 153,448]

Sequences

Amino acid sequence

Length: 140

>Phmamm.CG.MTP2014.S104.g03275.01.p
MVKASPSKDFNKHFRCRDINTVTESNIKRKTDSNAPSHVRKLKEKNELRTLYRQLKDVIP
SCKSKPVTSLDIVLRAVDYINELHGMLDEQQPEVNANDSSEQRFARQCMQIAANNARSMS
FHDITNVTMCTEMRTTPRIG

Nucleotide sequence

Length: 423

>Phmamm.CG.MTP2014.S104.g03275.01.t
ATGGTAAAAGCTAGCCCATCAAAGGACTTTAACAAGCACTTTAGATGCAGAGACATTAAT
ACTGTTACCGAATCGAATATCAAAAGGAAGACGGATTCAAATGCACCGAGCCATGTCCGA
AAGCTTAAGGAAAAGAATGAATTACGAACCTTGTACCGTCAATTGAAAGACGTCATCCCT
TCATGTAAATCGAAGCCAGTCACGAGTCTTGACATTGTACTTCGTGCTGTGGATTACATC
AATGAGTTACATGGCATGCTCGACGAACAGCAGCCCGAAGTCAATGCAAACGATAGCAGC
GAGCAGCGTTTCGCCCGCCAGTGCATGCAAATTGCAGCCAACAACGCGAGAAGCATGTCG
TTTCACGATATTACAAACGTGACAATGTGCACTGAAATGCGCACCACGCCTCGCATTGGT
TGA

InterProScan

PANTHER
DNA-bd_prot-inh (IPR026052) - T[29-105] 8.3E-13
ProSiteProfiles
bHLH_dom (IPR011598) - T[32-83] 8.67
SMART
bHLH_dom (IPR011598) - T[41-89] 0.005
Gene3D
HLH_DNA-bd_sf (IPR036638) - T[41-101] 9.4E-8
SUPERFAMILY
HLH_DNA-bd_sf (IPR036638) - T[46-100] 7.33E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value