Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S1036.g13379.01.t

Possible name(s)

STX17

Gene model

Phmamm.CG.MTP2014.S1036.g13379

Location

S1036 [11,865 / 14,260]

Sequences

Amino acid sequence

Length: 394

>Phmamm.CG.MTP2014.S1036.g13379.01.p
MNLWKLGRPRVLSLNLQAVREDLTKAIWRQEPIPQDIDLFELNKFLIGKRKINFESVSPT
VEEFVEIYVPLQVDKIYSVCGLIEKLKHLDNEEELKLKYEEASDVIQNLKQHLIEIDKLE
NHILDEDIDDFDLRVKPAKEKLRNATNHLLETTGHNMITCSAASQPNNQGFPPIRSPKAR
DLLSFLNGEETNDNNFQETSFNEHQIQTVEEQLPEVKKIDDDNLTLITCDKTSLEESLEN
LNHELLEVQELMNEFHQFVHLQGETVDQISENVDCAESSVIQGNVQLKKANILKAALFPI
LGAVVGGAVAGPIGFVAGAKVGSVRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGLAM
AGVTGSVVGYQGGKFLKKRQQEQIELSNLNESDR

Nucleotide sequence

Length: 1,346

>Phmamm.CG.MTP2014.S1036.g13379.01.t
ACGGTTGGTTAACTCGGGACTTCCCTGGTGAAGTCCTGAACAAAAAGTCAACAAAGAAGC
AAAAAATACGCGATATTGTTTCGTTTGTTTATGTTTTGGCAAGACCTGGTTTAAGAGGCC
ATCCGAATGACAATTAGAATGAAATGAATCTTTGGAAACTTGGCAGACCCAGAGTACTCA
GTCTAAACCTCCAAGCTGTTCGTGAAGATTTGACGAAAGCAATTTGGCGACAAGAACCAA
TTCCACAAGACATTGATTTATTTGAACTCAACAAATTTTTAATCGGGAAACGGAAAATAA
ATTTTGAATCAGTTTCCCCAACTGTTGAAGAATTTGTTGAAATTTACGTTCCACTTCAAG
TCGATAAAATTTACAGTGTTTGTGGCCTAATTGAAAAGCTGAAGCATTTAGACAATGAGG
AAGAATTAAAACTGAAATATGAAGAAGCTTCTGATGTTATACAGAATTTAAAACAACATT
TAATTGAAATTGACAAACTGGAAAATCATATTCTGGATGAAGATATTGACGATTTTGATC
TTCGCGTAAAACCAGCAAAAGAAAAACTCAGAAATGCCACAAATCATCTATTGGAAACAA
CGGGACACAACATGATCACATGCTCTGCTGCTAGTCAACCGAATAATCAAGGTTTTCCAC
CAATTCGATCCCCTAAAGCCAGAGACTTACTTAGTTTTCTTAATGGTGAAGAAACAAATG
ACAATAACTTTCAAGAAACAAGTTTTAATGAACATCAGATTCAAACTGTTGAAGAACAAC
TTCCAGAGGTGAAAAAAATTGATGATGATAATCTAACACTCATAACTTGTGATAAAACTA
GTTTGGAAGAATCTTTGGAGAACCTTAATCATGAACTTCTTGAGGTCCAAGAACTAATGA
ATGAGTTTCACCAATTTGTTCATTTGCAAGGTGAAACAGTGGATCAAATTTCTGAGAATG
TTGATTGCGCTGAAAGTAGCGTGATTCAAGGAAATGTTCAACTCAAGAAAGCAAATATTC
TTAAGGCTGCTTTATTTCCAATACTGGGTGCTGTGGTGGGTGGCGCAGTGGCTGGTCCAA
TCGGGTTCGTGGCAGGTGCTAAGGTTGGGAGTGTTAGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGATTGGCTATGGCCGGCGTTACAGGTTCTGTTGTGGGATATCAAGGTG
GAAAATTTCTAAAGAAACGACAACAGGAACAAATTGAGCTAAGCAACTTAAATGAATCGG
ACAGATGACATTTTGCTGATCCAGGG

InterProScan

PANTHER	STX17 (IPR028676) - T[51-328] 6.8E-43
SUPERFAMILY	SNARE (IPR010989) - T[98-283] 1.73E-5
ProSiteProfiles	T_SNARE_dom (IPR000727) - T[236-290] 11.268

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
STX17_HUMAN	26.568 %	83.6	4.39E-18