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  1. Transcript 'Moocul.CG.ELv1_2.S11...' > 
  2. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S101.g03200.02.t

Possible name(s)

TMF1

Gene model

Phmamm.CG.MTP2014.S101.g03200

Location

S101 [79,322 / 95,011]

Sequences

Amino acid sequence

Length: 1,149

>Phmamm.CG.MTP2014.S101.g03200.02.p
MSWFAFSDLAKSAITEAQKRIDKVLDIQEDEDGVPKTNLNKSLVATDLDSSVSKVSASAV
KDARRLTSSAKKSTQAQRKKGKPMKLGSSLTRNSENKPRKSSSSTSLNGSLSARLSPDNF
SEISLEPEDTLKQSDEINSTVPMKLEQSLLSVDETEPIKSSITGSLVADESCKEIVSNLK
QTVTPTNSHSDAAAVLNTEPLNTTLAGEDGATIPSSAGSPKTQCPQVVDQTHSPCGSTTA
SSDIDILDHESTFSETSSASKMTEFDNHLHMIGADPNHIRLSHDNFDSEASDIVRISGYC
SSPLSMDGYENNIVFKPSEKTERVCHEDTPASSGIEDESSVLFPPIRQDSSTDDNIRDSL
SMSSEDETQKDTCDDNMNDSQSSTVHIDNPTTDSMNAATEVISETDITKEQSATESVCED
VNKAMDNDGPVLEVPSNVNVQLEDEITQAALSVDESQHEATESPNKVVEVEVDSTATAQQ
NTAEIETVTVSSDEVNETQKKFEHYEQQLVTLSLNNAKLSEENDNLRSEVNNAKLKSLNS
FETEREEFLNTIDSLNVQLQELQFNNEELSENLQSAKTDLSQRLSNEQVQQLISEKEESI
QGLLEEGEALSKKHLQQNNLIKKLRSKASEREQAVTSLTEKLSKFEEENKSLKEKLSELK
GRSTEDRGTAERLTEAYQEREFRMSELVNQLEDSEEKRRAAQATLDAAYKELAELNKQQV
AIESEKEDEIRRHEEAVERRMQQDMERVEQEHEHQIHMLHLQMAELRDAVERTEAIATRK
EDQWRKEVQDLQQRLQDSELRNHELSEGITESTRPLLRQMENLQSTHSAQAKTWDALEKS
LTSRLVDAQTQLSAAQDRERSAQMTLVDVKSRAVTSERQLSDERKNKAGLLSELEMLRKK
TAEFDTVVEKLNRDLEMKEHSHAEVMSKARKDRLTLENQLDMEKVRAEVEKKKFQAQYES
LQREKEKLSWMSRSESMTSSNMLNTDAESIGSSDTFNHIDAFDRQLSASGAPSGVYESLR
SVASGSSLLENLQAQLKQRDGEIAQLQGEINTLERTRSSMAEEIVRLTNVNEDLEETAEQ
VADVKVKLQEMKARHDAVLTMYGEKAEEAEELKLDLEDVKAMYRQQTRRSHKAVSDPTPK
DDAGFNSSL

Nucleotide sequence

Length: 3,450

>Phmamm.CG.MTP2014.S101.g03200.02.t
ATGAGTTGGTTTGCATTTTCTGATCTGGCCAAGTCTGCAATAACTGAAGCACAGAAACGT
ATTGACAAAGTGTTGGACATACAGGAAGATGAAGATGGCGTCCCAAAGACCAATTTGAAC
AAGTCACTTGTTGCCACTGATTTAGATTCCTCTGTTTCCAAAGTAAGTGCATCAGCAGTT
AAAGATGCTCGACGTCTAACATCATCGGCTAAAAAGTCAACACAAGCTCAAAGAAAAAAA
GGAAAACCAATGAAACTTGGCAGCTCCCTAACTAGAAATTCTGAAAACAAACCTCGTAAA
TCAAGTTCCTCCACCAGTCTGAATGGAAGTTTATCAGCCAGGCTTTCACCTGACAACTTT
TCTGAGATCTCATTAGAACCTGAAGATACTTTGAAGCAAAGTGATGAAATTAATTCAACA
GTGCCCATGAAGCTTGAGCAATCTTTGCTCAGTGTAGATGAAACTGAACCAATTAAAAGC
AGTATCACAGGGTCCCTTGTTGCAGATGAGTCTTGCAAGGAAATTGTTTCTAACTTGAAG
CAAACTGTAACTCCAACAAACTCTCATAGTGATGCTGCTGCTGTGCTAAATACTGAACCT
TTGAACACAACTTTAGCTGGTGAGGATGGAGCAACAATACCTTCCTCAGCTGGATCTCCA
AAGACACAATGTCCACAAGTTGTTGACCAAACCCATTCACCTTGTGGTTCAACAACAGCA
TCCAGTGACATTGATATTCTTGACCATGAAAGTACATTCAGTGAAACATCATCAGCATCC
AAGATGACTGAATTCGATAACCACCTACATATGATAGGTGCTGACCCCAATCACATAAGA
TTGTCACATGATAACTTTGACAGTGAAGCATCGGACATTGTTCGCATTAGTGGTTACTGT
TCATCACCGTTATCTATGGATGGTTATGAGAACAACATTGTCTTCAAACCATCAGAAAAA
ACTGAAAGAGTTTGTCATGAAGACACTCCAGCATCTAGTGGCATAGAAGATGAGTCAAGC
GTTTTATTTCCGCCAATACGACAAGACAGCTCCACAGACGACAACATCCGAGATTCCTTG
TCGATGTCCTCTGAAGATGAAACACAAAAAGACACTTGTGATGACAATATGAACGACAGC
CAGTCCTCCACAGTGCACATAGACAATCCCACCACAGACTCAATGAATGCAGCCACTGAA
GTAATATCTGAAACAGATATTACAAAAGAGCAATCTGCCACAGAAAGTGTATGTGAAGAT
GTGAATAAAGCTATGGACAATGATGGACCTGTATTGGAAGTGCCAAGCAATGTTAATGTA
CAGCTTGAAGATGAAATCACGCAAGCCGCATTGTCTGTTGATGAAAGTCAACATGAAGCA
ACTGAATCACCAAATAAAGTCGTTGAAGTTGAAGTTGATAGTACTGCAACAGCCCAACAA
AATACAGCTGAGATTGAAACTGTAACAGTCTCTTCTGATGAAGTAAATGAAACTCAGAAA
AAGTTTGAACATTACGAACAGCAACTTGTTACCCTGAGTCTAAACAATGCCAAGTTATCT
GAAGAAAATGACAATTTACGATCGGAAGTGAACAATGCAAAACTCAAGTCACTAAACAGT
TTCGAAACAGAAAGAGAAGAGTTTTTGAACACCATTGATTCTTTAAATGTACAACTGCAG
GAACTGCAGTTCAACAATGAGGAGTTATCAGAAAACTTGCAAAGTGCCAAAACTGATTTA
AGTCAAAGATTAAGTAATGAACAAGTGCAACAACTTATATCTGAAAAGGAAGAATCGATA
CAGGGATTATTAGAGGAAGGTGAGGCACTATCAAAGAAGCACTTGCAACAAAACAATTTG
ATCAAGAAACTTCGCAGCAAAGCGAGTGAAAGGGAACAAGCAGTAACAAGCCTCACAGAG
AAACTAAGCAAGTTTGAAGAAGAAAACAAATCGCTCAAAGAGAAATTATCAGAACTGAAG
GGACGGAGTACGGAAGACCGTGGCACCGCTGAGCGACTCACTGAAGCATATCAGGAGCGC
GAGTTCCGAATGAGTGAGCTTGTCAATCAACTTGAAGACTCAGAGGAAAAACGAAGAGCT
GCACAGGCTACTCTGGATGCAGCGTACAAAGAGCTTGCCGAATTAAACAAGCAGCAGGTG
GCGATAGAGAGCGAAAAAGAGGACGAAATTCGCCGCCATGAGGAGGCAGTAGAGAGACGT
ATGCAGCAGGACATGGAACGTGTTGAACAGGAACACGAACATCAAATACACATGCTACAT
CTACAGATGGCTGAGTTACGCGACGCCGTTGAACGAACTGAGGCCATTGCAACAAGAAAA
GAAGACCAATGGAGGAAAGAAGTGCAAGATCTGCAACAGAGGCTGCAAGACTCTGAACTT
CGTAACCACGAACTCAGCGAAGGCATTACGGAGTCGACCAGACCACTTCTTCGGCAAATG
GAGAATTTACAGTCAACGCATTCCGCACAGGCAAAAACCTGGGACGCCTTGGAAAAGAGT
TTAACCTCTAGATTAGTCGACGCCCAAACCCAGCTATCCGCCGCCCAAGACCGCGAACGC
TCTGCACAGATGACGTTAGTCGATGTAAAGTCACGTGCCGTCACGTCGGAGCGACAGTTG
TCGGATGAGCGTAAAAACAAGGCCGGACTCCTCTCGGAGCTTGAGATGCTGAGAAAAAAA
ACTGCTGAGTTCGACACTGTGGTAGAAAAATTAAACCGGGATCTTGAGATGAAGGAACAT
TCTCATGCTGAGGTGATGAGCAAGGCCAGGAAGGATCGACTGACTCTCGAAAATCAGCTG
GACATGGAAAAAGTTCGGGCAGAAGTCGAAAAGAAAAAGTTCCAAGCCCAATACGAGAGT
TTACAACGGGAGAAGGAAAAACTGTCTTGGATGAGCCGTTCAGAAAGTATGACGTCATCC
AATATGTTGAACACGGATGCAGAGTCTATTGGCAGTTCGGACACTTTTAATCACATCGAT
GCCTTTGATCGACAGTTGAGCGCTTCGGGGGCACCTAGCGGCGTGTATGAAAGTTTGAGG
TCGGTCGCTAGCGGTTCCTCACTTCTCGAAAACCTGCAAGCACAGCTGAAACAGCGGGAC
GGCGAAATCGCCCAGTTACAGGGCGAAATTAACACATTAGAAAGAACTCGATCTTCTATG
GCCGAAGAAATCGTTCGACTAACCAATGTAAACGAGGACTTAGAAGAAACCGCCGAACAG
GTCGCTGACGTCAAAGTGAAATTACAGGAGATGAAAGCGCGCCATGACGCTGTGCTGACG
ATGTACGGTGAAAAGGCGGAGGAAGCTGAAGAATTAAAACTGGATCTTGAGGACGTGAAA
GCGATGTATCGCCAACAGACTCGACGCAGCCATAAAGCGGTCAGCGACCCTACCCCCAAG
GACGATGCGGGTTTTAATTCCTCACTATAA

InterProScan

Pfam
TMF_DNA-bd (IPR022092) - T[588-659] 4.5E-14
Pfam
TMF_TATA-bd (IPR022091) - T[1024-1127] 1.3E-28

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TMF1_HUMAN 37.697 % 348 2.72E-102