- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S1017.g13284.01.t
Possible name(s)
AL139011.2; DCAF8; DCAF8L2
Gene model
Location
S1017 [33,118 / 41,469]
Amino acid sequence
Length: 717
>Phmamm.CG.MTP2014.S1017.g13284.01.p
MEVNPSDNGCGDASVTFGLSEEAAKTENMDDSGFGTSSSAVTPIDEDCEATLSNENTKSV
TDDQSKSMGDMNTDNKKLPDKDILHPAETMVAEKVDQSKGDSSENLVDIFKDDCDETSEQ
EKFNPENGESKTNCDSGSTSLFKKRQCKFKAKRRNEEEEMSCDSPGDDNNPPEGQDMSPS
TAKKAKKGGTNDESGSDEFVDAPDTLDDIQHRISATSSSLSSSSSDSDQDLGTKEEDKKV
KEEEEQVWLLKDIDDLPKPRWRAVKELRQRQCSSWNQFWPYKVCGCRGMVKRFELHQELE
KHEGCVNALHFNQSGTLLASGSDDLNIMLWDWTIKNGKPLISFDSGHRSNVFQAKFLPEC
GDSVVVSTARDGQVRYANISATGTCNVTKKLAQHRGSAHKLTLDVDSKSTFLSCGEDGVV
FGIDLRLDKPANKLVTVKVGSRKIPLYSIHTNPARPYEFAVSGRDTKAYIFDRRMLNSDG
NLSVVKTYCPQHLQDVSNVKANITCLVYNWDGSELLCSYNDEDIYLFDTTHSEGADYLRR
YKGHRNNATVKGVNFYGPHSEFVVSGSDCGNIFFWEKESSRIVQLMEGDKGGVVNVLEPH
PSLPVIATSGLDHEVKIWTPTATPNTKVNKMAELKEFMLSNRRDREEEIRSMTDMIDGQM
LWFLMRTLRNRTRRRAANSREHNDDTTSESDLSDSTSTSSSSEDPEDSYREPRCIQS
Nucleotide sequence
Length: 2,154
>Phmamm.CG.MTP2014.S1017.g13284.01.t
ATGGAGGTGAACCCAAGTGACAATGGGTGTGGTGATGCTTCAGTCACATTTGGTTTATCT
GAAGAGGCAGCTAAAACAGAAAATATGGATGACTCTGGATTTGGTACAAGCTCAAGCGCT
GTAACACCAATAGATGAAGACTGTGAAGCTACATTGTCCAATGAAAATACCAAAAGTGTC
ACAGATGATCAATCAAAAAGCATGGGGGATATGAACACAGACAACAAAAAGTTGCCAGAT
AAGGACATTCTTCATCCAGCCGAGACAATGGTTGCAGAAAAAGTGGATCAAAGCAAAGGC
GACAGCAGTGAAAATTTGGTTGACATTTTCAAAGACGATTGTGATGAAACTTCTGAGCAA
GAGAAATTTAACCCTGAAAATGGAGAATCAAAAACAAACTGTGACTCAGGGAGCACCTCC
TTGTTTAAAAAAAGACAATGTAAATTTAAAGCCAAGCGAAGAAATGAAGAGGAAGAAATG
TCATGTGATAGTCCTGGTGATGACAACAATCCACCTGAGGGCCAAGATATGTCTCCATCC
ACTGCTAAAAAAGCCAAAAAAGGTGGCACAAATGATGAGAGTGGAAGTGATGAATTTGTT
GATGCACCCGACACACTAGATGATATTCAGCATAGAATATCAGCTACATCGAGCTCCCTG
TCCTCCAGCAGCTCTGATTCTGACCAGGATCTCGGCACCAAGGAGGAGGACAAAAAGGTC
AAGGAAGAGGAAGAGCAAGTTTGGTTACTAAAAGATATTGACGACCTTCCTAAACCAAGG
TGGAGGGCCGTAAAAGAACTACGACAAAGACAATGTAGTTCCTGGAACCAGTTTTGGCCT
TACAAAGTTTGTGGGTGCCGAGGCATGGTAAAAAGATTTGAACTACATCAGGAATTAGAA
AAACACGAAGGTTGCGTTAATGCTCTACACTTCAACCAAAGTGGGACATTGCTTGCTTCG
GGAAGTGATGATTTGAATATTATGTTATGGGACTGGACAATTAAGAATGGAAAGCCTTTG
ATATCTTTTGATTCTGGTCATAGGAGTAACGTATTTCAAGCAAAATTCTTGCCGGAATGT
GGAGACTCTGTTGTTGTAAGCACAGCAAGAGATGGACAGGTGAGGTATGCAAACATTTCC
GCCACGGGAACATGTAATGTAACGAAGAAGCTTGCTCAACATCGAGGATCAGCTCATAAA
CTCACATTAGATGTTGACTCTAAATCAACATTTCTATCCTGTGGTGAAGATGGGGTTGTG
TTTGGAATTGACTTACGTTTAGACAAGCCTGCAAATAAATTAGTAACAGTAAAAGTAGGA
AGCAGAAAAATCCCCCTGTACTCCATACACACCAATCCAGCGCGGCCGTATGAGTTTGCA
GTTAGTGGTCGGGACACAAAAGCCTACATATTTGACCGACGAATGCTAAATTCAGATGGC
AACCTTTCAGTGGTAAAAACCTACTGCCCCCAACATTTACAGGATGTGTCCAATGTCAAA
GCCAATATAACATGTTTGGTTTATAACTGGGACGGGAGTGAATTACTATGCAGTTACAAT
GATGAAGATATTTATCTTTTTGACACCACCCACTCAGAAGGGGCAGATTATTTGCGCAGA
TATAAAGGTCACCGAAACAATGCCACCGTCAAAGGAGTAAACTTCTATGGTCCACACTCT
GAGTTTGTCGTGTCTGGTAGCGACTGTGGAAACATATTTTTCTGGGAAAAAGAATCTTCC
CGAATTGTGCAATTAATGGAAGGTGACAAGGGAGGTGTGGTAAACGTTCTTGAGCCACAT
CCCAGTTTGCCAGTGATTGCAACAAGCGGTCTTGACCATGAGGTGAAAATCTGGACTCCG
ACTGCCACCCCAAACACCAAAGTCAACAAAATGGCTGAACTCAAAGAGTTTATGTTGTCA
AATCGACGGGACAGAGAAGAGGAGATAAGAAGTATGACCGATATGATTGACGGCCAAATG
CTTTGGTTTTTAATGAGAACATTACGAAACAGAACGCGTCGAAGAGCTGCAAATAGCCGG
GAACATAATGATGACACAACTTCAGAAAGTGATCTAAGTGATTCTACGTCCACTTCTAGT
TCATCTGAGGATCCTGAGGACAGTTACAGGGAACCGCGTTGTATTCAATCCTGA
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[286-621] 3.0E-48 |
| SMART |
WD40_repeat (IPR001680) - T[292-331] 1.3E-7 - T[336-378] 0.69 - T[384-424] 4.6 - T[431-472] 50.0 - T[489-528] 6.3 - T[534-576] 0.61 - T[579-619] 0.72 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[293-618] 3.97E-47 |
| Pfam |
WD40_repeat (IPR001680) - T[298-331] 6.0E-5 - T[537-575] 0.094 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[299-331] 13.416 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[299-628] 16.717 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DCAF8_HUMAN | 57.639 % | 531 | 0 |
| DC8L2_HUMAN | 51.454 % | 477 | 1.21E-160 |
| DC8L1_HUMAN | 48.498 % | 459 | 8.57E-154 |