- Transcript 'Cisavi.CG.ENS81.R97....' >
- Transcript 'KH2012:KH.C2.693.v1....' >
- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S100.g03185.01.t
Possible name(s)
LRIG2; RTN4R; RTN4RL2
Gene model
Location
S100 [190,857 / 197,153]
Amino acid sequence
Length: 559
>Phmamm.CG.MTP2014.S100.g03185.01.p
MRYLQLIIAKVGVLVWIECTFAYSCKDGTPKRDKMCYVDYKTEEMWCDDSNLTQIPDPDT
IQAYMNPAYSMRLFFNSTCLENLQSDLVPYTRLQVLNLDGNKMTRISAQPFRACTKLTTL
ILSHNQIAHIDDNAFNGLTELEVLSLSSNKLTRISATLFTELGNLKTLTLANNAIEVIET
NAFSGLAKLESLDLSGNKIRRLDWGYETVFQNLGLLESVQMSGNQLASLNADWFRSVFKH
GKEPDAATYVNGNLWNCDCSAYFYWHMLTSEIVTKKWRSALDVECRLPAKYQGRKLSRFK
QSYFDVCESKEENKNCSAPPTIKPPTTKSSTTTTTTTTIVTTKSTTPKIVLPKITADKMV
DNKKENMTIVASNDKAPTGTSPPRELWIVIMVVIGCLVMISILVAVKRLRCSVSRVKQDK
DEEKQNPNFVQENREDIIEQTTPNMPLNAQQNQSQQNHVYSDPESNPNNNCCPKRNRNDS
GCYSNHEDEGLSFLSNLQDIQEGVLEQGDTVPKQHHVTQEGHGSPTQMNSFVKLESSHPV
KIVMELPQGSCMHCGNINK
Nucleotide sequence
Length: 1,680
>Phmamm.CG.MTP2014.S100.g03185.01.t
ATGCGTTACTTGCAATTGATTATCGCCAAAGTTGGAGTCCTTGTGTGGATCGAATGCACA
TTTGCGTACAGTTGCAAAGACGGAACACCGAAAAGAGATAAGATGTGCTATGTTGATTAC
AAGACAGAGGAGATGTGGTGTGACGATTCAAATCTCACACAAATCCCTGATCCAGACACT
ATTCAGGCTTACATGAATCCAGCTTATAGCATGCGTCTGTTTTTCAACTCAACTTGTCTC
GAAAACCTCCAAAGTGATCTGGTGCCATACACTAGACTTCAAGTTCTCAACTTGGATGGC
AACAAGATGACACGCATCAGTGCACAGCCGTTCCGCGCTTGCACCAAGCTGACCACCCTT
ATTCTCTCCCACAACCAAATTGCTCACATTGACGACAACGCGTTTAATGGTTTGACTGAA
CTCGAAGTCTTGTCTCTAAGCAGCAACAAATTAACTCGGATCAGCGCAACGTTGTTCACC
GAACTCGGAAACCTTAAAACTCTTACTTTGGCAAATAACGCAATCGAGGTAATAGAGACA
AATGCATTCAGTGGATTGGCAAAACTGGAGAGTTTGGACTTGAGTGGAAACAAAATTCGA
CGCCTTGATTGGGGTTACGAGACTGTGTTTCAAAATCTGGGGTTGCTGGAAAGCGTGCAA
ATGAGCGGTAACCAGTTGGCTAGCTTGAACGCCGATTGGTTCCGGAGCGTTTTCAAACAC
GGCAAAGAGCCCGACGCTGCAACCTACGTAAACGGAAACCTGTGGAATTGTGATTGCTCT
GCGTACTTCTACTGGCATATGTTGACAAGCGAAATCGTAACTAAGAAATGGAGGAGTGCG
CTCGACGTAGAATGCCGTTTACCAGCAAAGTACCAAGGAAGAAAGCTTAGTCGGTTCAAA
CAGTCCTACTTCGATGTTTGTGAGTCAAAGGAAGAAAACAAAAACTGTTCAGCCCCACCG
ACGATCAAACCACCAACTACCAAGTCCTCCACCACCACTACAACAACCACTACTATAGTA
ACCACCAAAAGTACAACACCAAAAATAGTTCTTCCGAAAATAACTGCTGATAAAATGGTT
GACAATAAAAAAGAGAACATGACTATTGTAGCAAGCAATGACAAAGCGCCAACGGGCACA
TCCCCACCTAGAGAACTTTGGATTGTTATAATGGTTGTAATAGGTTGTCTTGTAATGATT
AGCATATTGGTTGCCGTAAAACGCTTGAGGTGCAGTGTAAGTCGGGTGAAACAGGACAAG
GATGAGGAAAAACAGAATCCAAATTTTGTTCAGGAAAACCGGGAAGACATAATCGAACAG
ACAACACCGAATATGCCTCTTAATGCGCAACAAAATCAGTCGCAACAAAATCACGTCTAT
TCTGATCCCGAATCGAATCCGAATAACAATTGCTGTCCGAAACGGAACCGGAACGACAGC
GGGTGTTATTCTAATCACGAAGACGAGGGTTTAAGTTTTCTTTCCAATTTGCAGGATATT
CAAGAGGGGGTGCTTGAGCAGGGCGACACAGTTCCCAAGCAACATCACGTGACACAAGAA
GGCCACGGATCACCGACGCAAATGAACTCGTTCGTGAAGTTAGAGTCCTCTCATCCGGTG
AAGATAGTAATGGAACTTCCTCAAGGCTCTTGTATGCATTGTGGAAATATCAACAAGTGA
| Gene3D |
LRR_dom_sf (IPR032675) - T[19-175] 8.0E-27 - T[176-310] 9.4E-20 |
| SMART |
Leu-rich_rpt_typical-subtyp (IPR003591) - T[90-113] 120.0 - T[114-137] 0.12 - T[138-161] 0.0062 - T[162-185] 0.0038 - T[186-212] 0.11 - T[213-236] 7.5 |
| ProSiteProfiles |
Leu-rich_rpt (IPR001611) - T[92-113] 6.518 - T[116-137] 8.012 - T[140-161] 7.165 - T[164-185] 7.204 - T[188-209] 7.05 - T[215-236] 4.501 |
| Pfam |
Leu-rich_rpt (IPR001611) - T[114-127] 0.3 - T[140-199] 1.9E-17 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RTN4R_HUMAN | 29.344 % | 92 | 9.1E-20 |
| LRIG2_HUMAN | 29.749 % | 93.2 | 1.09E-19 |
| R4RL2_HUMAN | 29.817 % | 92 | 7.16E-20 |