- Transcript 'Phfumi.CG.MTP2014.S1...' >
- Transcript 'Haaura.CG.MTP2014.S9...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S9.g00298.01.t
Possible name(s)
TBX2; TBX3; TBX4
Gene model
Location
S9 [81,878 / 90,050]
Amino acid sequence
Length: 685
>Haaura.CG.MTP2014.S9.g00298.01.p
MGIPCRIISHGRMFPSFKVKVSGLNKNSKYIMLMDIVAADDCRYKFHNSRWMVAGKADPE
LPKRMYIHPDSPATGEQWMNRPGVSFHKLKLTNNIADPHGHTILNSMHKYQPRFHVVRCG
DLSKLPYCHFRTYVFKEMQFIAVTAYQNEKITQLKIDHNPFAKGFRDSGSGKREKRQHFH
LQDQMIVNSRVPDTVSNSHKLSSQEHQGRKRITESHDEFKRKSEKTQSTDTILSSSPDRV
IRAESSSNQIGNSESSSKRHDRTDQKRFSPYHHSTSSGGQLHDESMKSSSMFHSDSSGSP
DRRNSPEVTSSTTDIDIPNDRSSPYPGNSHDKPASRNTSSPRPSSPPVLTSSTTINSPIP
IHPGFSGLGAYPNALMQHYAAAAGLQPNYPYLHSSHLSALSAAMNVGGNVLHSAPGGFNP
ALFQAAVGNNNGLGSIASSRSPSFLPGLHGATHNQALSSLLSSSSISSLNPYANFFPYAA
AYNPYIAAAAAKGSDGIPGASTSSMALAERLYRQSAVAFSKSLGEAALSRSGAMSTSPTS
SSMSGASSMRYSPYKLPHLPPFGMVGGVLRPSPTSAVGEGSNSSRKFLGEQTTPRNRLAS
GTSNSPSSPRSPEYHPIRRDSSDYDMRRQPERKGDDDRNTTTGGIGSAVQELRNMERLVS
GLEQRGRRSQDILNNSQLFRIGHL*
Nucleotide sequence
Length: 2,131
>Haaura.CG.MTP2014.S9.g00298.01.t
ATGGGTATTCCATGTAGGATAATCTCTCATGGGAGAATGTTCCCGTCTTTTAAAGTAAAA
GTATCCGGGCTGAACAAAAACTCGAAATACATAATGCTGATGGACATAGTCGCAGCAGAC
GATTGCCGGTACAAATTCCACAACTCGCGGTGGATGGTTGCGGGTAAAGCGGACCCAGAG
TTACCAAAACGCATGTATATTCATCCCGACTCCCCAGCCACCGGGGAGCAGTGGATGAAT
AGACCAGGAGTTTCATTTCACAAACTCAAACTAACGAACAACATAGCCGATCCACATGGA
CATACGATTCTTAACTCGATGCACAAATATCAACCGCGCTTCCACGTTGTTCGATGCGGG
GACCTGTCGAAGCTGCCATATTGTCATTTCCGCACATATGTATTCAAAGAAATGCAGTTC
ATTGCAGTAACCGCTTATCAGAACGAAAAGATCACTCAATTAAAAATCGATCACAATCCG
TTTGCGAAGGGCTTTCGAGATTCTGGAAGCGGAAAACGAGAAAAAAGACAGCATTTTCAT
CTGCAAGACCAGATGATTGTCAATTCCCGCGTACCAGACACTGTATCGAACTCACATAAG
CTGTCGTCACAAGAGCATCAAGGGCGTAAACGAATAACAGAATCGCACGACGAATTTAAA
AGGAAAAGTGAAAAAACGCAATCTACAGACACCATTTTATCTTCATCTCCCGACCGTGTC
ATCAGGGCGGAGAGCAGCAGTAATCAGATTGGTAATAGTGAATCGTCAAGCAAAAGACAT
GACAGAACGGATCAGAAGAGGTTCTCTCCGTATCATCACTCTACCTCGAGCGGAGGACAA
CTGCACGACGAATCTATGAAATCATCCTCCATGTTTCACTCCGATTCATCCGGTTCTCCA
GACCGAAGAAACAGCCCGGAAGTAACTTCATCTACCACAGATATCGACATCCCCAACGAT
CGTTCATCTCCGTATCCAGGCAACTCCCATGACAAGCCAGCGTCACGCAATACGTCATCG
CCACGACCGTCTTCACCACCTGTACTGACATCATCAACCACCATCAATTCGCCGATACCA
ATTCATCCTGGCTTTTCTGGCCTCGGCGCTTATCCCAATGCACTGATGCAACATTATGCC
GCTGCGGCCGGATTGCAACCCAACTATCCGTATCTCCATTCCAGTCATCTATCGGCATTG
TCGGCTGCGATGAATGTGGGAGGCAACGTTTTACATAGCGCACCAGGTGGTTTTAATCCT
GCACTGTTCCAAGCCGCCGTAGGAAACAATAACGGCCTGGGTTCTATCGCTTCATCTCGT
TCACCTTCCTTCCTTCCCGGTCTCCATGGTGCAACGCATAATCAAGCGTTGTCATCACTC
CTTTCTTCCAGTTCTATATCGAGCCTAAATCCGTATGCTAATTTCTTCCCATACGCTGCA
GCGTACAATCCATATATTGCAGCAGCTGCTGCCAAAGGAAGTGATGGAATTCCTGGAGCT
TCAACGTCTTCAATGGCACTCGCTGAAAGATTGTATCGACAATCTGCTGTTGCTTTTAGT
AAAAGTCTTGGCGAAGCTGCCTTATCACGGTCGGGTGCCATGTCCACTTCACCGACTTCA
TCTTCAATGAGCGGTGCATCGTCGATGCGATATTCTCCATATAAATTACCCCATTTACCT
CCGTTTGGCATGGTAGGCGGAGTCTTACGGCCGTCGCCGACTTCGGCTGTCGGGGAAGGA
TCAAACAGTTCAAGAAAGTTTCTAGGGGAACAGACAACACCAAGAAATCGATTAGCATCC
GGTACGAGCAATTCGCCGAGTAGTCCTCGCAGTCCAGAATATCATCCTATTCGTCGCGAT
TCAAGTGATTATGACATGAGACGACAACCGGAAAGAAAGGGAGACGACGATCGGAATACT
ACCACCGGCGGAATAGGATCTGCCGTTCAAGAACTCAGAAATATGGAACGACTGGTATCT
GGTCTCGAACAGAGAGGGAGGAGAAGCCAGGATATTCTAAACAATTCCCAATTGTTCCGA
ATCGGCCACTTATGACGTGTGTATGTTCTTTGCTGTGCTATCGCAAGATTCTTATTTATC
AAAGAAGCGTGAAAACTCAGGTTTATTGTGA
| PRINTS |
TF_T-box (IPR001699) - T[1-25] 1.5E-26 - T[66-79] 1.5E-26 - T[103-117] 1.5E-26 - T[138-151] 1.5E-26 - T[159-167] 1.5E-26 |
| SMART |
TF_T-box (IPR001699) - T[2-172] 3.1E-94 |
| Gene3D |
T-box_sf (IPR036960) - T[6-173] 9.2E-80 |
| CDD |
TF_T-box (IPR001699) - T[7-169] 1.02065E-103 |
| Pfam |
TF_T-box (IPR001699) - T[10-167] 5.6E-68 |
| SUPERFAMILY |
p53-like_TF_DNA-bd (IPR008967) - T[11-167] 8.32E-64 |
| PANTHER |
TF_T-box (IPR001699) - T[11-667] 7.7E-137 |
| ProSiteProfiles |
TF_T-box (IPR001699) - T[12-167] 61.255 |
| PRINTS |
TF_Brachyury (IPR002070) - T[46-66] 7.8E-6 - T[108-125] 7.8E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBX2_HUMAN | 80.588 % | 309 | 2.55E-95 |
| TBX3_HUMAN | 39.293 % | 303 | 1.32E-92 |
| TBX4_HUMAN | 64.151 % | 216 | 2.4E-62 |