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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C11.577.v2...' > 
  2. Transcript 'Mooccu.CG.ELv1_2.S50...' > 
  3. Region 'REG00001556' > 
  4. Transcript 'Haaura.CG.MTP2014.S9...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S986.g07300.02.t

Possible name(s)

ACTA1; ACTA2; ACTC1

Gene model

Haaura.CG.MTP2014.S986.g07300

Location

S986 [7,394 / 8,785]

Sequences

Amino acid sequence

Length: 341

>Haaura.CG.MTP2014.S986.g07300.02.p
MSDGEEDTTAIVCDNGSGLVKSGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE
AQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANRE
KMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHNVPIYEGYALPHAIAR
LDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFEQEMATAASSTSLE
KSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANN
VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYS

Nucleotide sequence

Length: 1,023

>Haaura.CG.MTP2014.S986.g07300.02.t
ATGTCTGATGGTGAAGAAGATACAACCGCAATCGTCTGCGACAACGGATCAGGATTGGTT
AAATCTGGTTTTGCTGGCGATGATGCACCAAGAGCAGTTTTCCCGTCAATTGTCGGTCGT
CCAAGACATCAAGGTGTCATGGTCGGTATGGGACAGAAGGACAGCTACGTAGGAGACGAA
GCACAAAGCAAGCGAGGAATCCTGACTTTGAAATATCCCATTGAACATGGTATCATCACT
AACTGGGATGATATGGAAAAGATTTGGCATCACACTTTCTATAATGAACTCCGTGTTGCT
CCTGAAGAACATCCAACACTTTTGACTGAAGCTCCTTTGAATCCTAAAGCCAACAGAGAA
AAGATGACCCAAATTATGTTCGAGACCTTCAATGTACCAGCTATGTACGTCGCTATCCAA
GCTGTTCTATCCCTCTATGCATCTGGAAGAACCACCGGCATTGTTTTGGATTCTGGTGAT
GGTGTCTCCCACAATGTTCCCATCTACGAAGGATACGCTCTACCCCATGCAATCGCACGT
TTGGATCTGGCCGGCCGCGATTTAACCGATTATTTAATGAAAATTCTCACAGAAAGAGGA
TATTCTTTCGTTACCACAGCTGAACGTGAAATCGTCCGAGATATCAAAGAAAAATTATGC
TATGTCGCACTAGACTTTGAACAAGAGATGGCAACAGCGGCCTCCTCAACCTCGCTTGAA
AAGAGTTACGAACTTCCGGACGGACAAGTCATCACGATCGGAAACGAAAGATTCCGTTGT
CCGGAAACACTTTTCCAGCCATCGTTCATCGGTATGGAATCTGCTGGTATTCACGAAACA
ACTTACAATTCCATCATGAAATGCGATATTGACATCCGCAAAGATCTTTATGCAAACAAC
GTTCTATCCGGTGGAACCACCATGTATCCTGGTATCGCTGATCGCATGCAAAAAGAAATA
ACTGCTCTTGCACCAAGCACGATGAAAATCAAGATCATCGCTCCTCCCGAACGTAAATAC
TCT

InterProScan

PANTHER
Actin (IPR004000) - T[5-341] 1.0E-239
Pfam
Actin (IPR004000) - T[6-341] 6.1E-123
SMART
Actin (IPR004000) - T[8-341] 2.7E-186
PRINTS
Actin (IPR004000) - T[29-38] 3.7E-58 - T[52-63] 3.7E-58 - T[64-86] 3.7E-58 - T[118-131] 3.7E-58 - T[143-162] 3.7E-58 - T[239-255] 3.7E-58
ProSitePatterns
Actin_CS (IPR004001) - T[56-66] .
ProSitePatterns
Actin/actin-like_CS (IPR020902) - T[107-119] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ACTA_HUMAN 97.329 % 689 0
ACTS_HUMAN 97.329 % 689 0
ACTC_HUMAN 97.626 % 690 0