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TRANSCRIPT CARD

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  1. Region 'REG00001383' > 
  2. Region 'REG00000861' > 
  3. Region 'REG00000773' > 
  4. Region 'REG00001227' > 
  5. Transcript 'Haaura.CG.MTP2014.S9...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S986.g07300.01.t

Possible name(s)

ACTA1; ACTA2; ACTC1

Gene model

Haaura.CG.MTP2014.S986.g07300

Location

S986 [6,415 / 8,785]

Sequences

Amino acid sequence

Length: 358

>Haaura.CG.MTP2014.S986.g07300.01.p
MSDGEEDTTAIVCDNGSGLVKSGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE
AQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANRE
KMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHNVPIYEGYALPHAIAR
LDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFEQEMATAASSTSLE
KSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANN
VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERCCNSNRTRLTNRFKRKRNK*

Nucleotide sequence

Length: 1,228

>Haaura.CG.MTP2014.S986.g07300.01.t
ATGTCTGATGGTGAAGAAGATACAACCGCAATCGTCTGCGACAACGGATCAGGATTGGTT
AAATCTGGTTTTGCTGGCGATGATGCACCAAGAGCAGTTTTCCCGTCAATTGTCGGTCGT
CCAAGACATCAAGGTGTCATGGTCGGTATGGGACAGAAGGACAGCTACGTAGGAGACGAA
GCACAAAGCAAGCGAGGAATCCTGACTTTGAAATATCCCATTGAACATGGTATCATCACT
AACTGGGATGATATGGAAAAGATTTGGCATCACACTTTCTATAATGAACTCCGTGTTGCT
CCTGAAGAACATCCAACACTTTTGACTGAAGCTCCTTTGAATCCTAAAGCCAACAGAGAA
AAGATGACCCAAATTATGTTCGAGACCTTCAATGTACCAGCTATGTACGTCGCTATCCAA
GCTGTTCTATCCCTCTATGCATCTGGAAGAACCACCGGCATTGTTTTGGATTCTGGTGAT
GGTGTCTCCCACAATGTTCCCATCTACGAAGGATACGCTCTACCCCATGCAATCGCACGT
TTGGATCTGGCCGGCCGCGATTTAACCGATTATTTAATGAAAATTCTCACAGAAAGAGGA
TATTCTTTCGTTACCACAGCTGAACGTGAAATCGTCCGAGATATCAAAGAAAAATTATGC
TATGTCGCACTAGACTTTGAACAAGAGATGGCAACAGCGGCCTCCTCAACCTCGCTTGAA
AAGAGTTACGAACTTCCGGACGGACAAGTCATCACGATCGGAAACGAAAGATTCCGTTGT
CCGGAAACACTTTTCCAGCCATCGTTCATCGGTATGGAATCTGCTGGTATTCACGAAACA
ACTTACAATTCCATCATGAAATGCGATATTGACATCCGCAAAGATCTTTATGCAAACAAC
GTTCTATCCGGTGGAACCACCATGTATCCTGGTATCGCTGATCGCATGCAAAAAGAAATA
ACTGCTCTTGCACCAAGCACGATGAAAATCAAGATCATCGCTCCTCCCGAACGTTGCTGT
AATTCAAATAGAACACGTCTGACAAACAGATTCAAACGGAAACGGAATAAATAAACGACT
TCTATTCACATTGGATATTTTTATTGCTGGCTTCCATCATAATTATTTACCTATACATGG
CATTTGTTCAGATAATTTTTATAGCAATGATAACAATGAGATTTTTGCACATCCAATATC
CTGGAGGAATCCTTTTATACAGGTAGTT

InterProScan

PANTHER
Actin (IPR004000) - T[5-339] 1.2E-237
Pfam
Actin (IPR004000) - T[6-338] 7.0E-122
SMART
Actin (IPR004000) - T[8-357] 1.4E-190
PRINTS
Actin (IPR004000) - T[29-38] 4.8E-58 - T[52-63] 4.8E-58 - T[64-86] 4.8E-58 - T[118-131] 4.8E-58 - T[143-162] 4.8E-58 - T[239-255] 4.8E-58
ProSitePatterns
Actin_CS (IPR004001) - T[56-66] .
ProSitePatterns
Actin/actin-like_CS (IPR020902) - T[107-119] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ACTA_HUMAN 97.305 % 683 0
ACTS_HUMAN 97.305 % 683 0
ACTC_HUMAN 97.605 % 684 0