- Transcript 'Haaura.CG.MTP2014.S9...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S986.g07300.01.t
Possible name(s)
ACTA1; ACTA2; ACTC1
Gene model
Location
S986 [6,415 / 8,785]
Amino acid sequence
Length: 358
>Haaura.CG.MTP2014.S986.g07300.01.p
MSDGEEDTTAIVCDNGSGLVKSGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE
AQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANRE
KMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHNVPIYEGYALPHAIAR
LDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFEQEMATAASSTSLE
KSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANN
VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERCCNSNRTRLTNRFKRKRNK*
Nucleotide sequence
Length: 1,228
>Haaura.CG.MTP2014.S986.g07300.01.t
ATGTCTGATGGTGAAGAAGATACAACCGCAATCGTCTGCGACAACGGATCAGGATTGGTT
AAATCTGGTTTTGCTGGCGATGATGCACCAAGAGCAGTTTTCCCGTCAATTGTCGGTCGT
CCAAGACATCAAGGTGTCATGGTCGGTATGGGACAGAAGGACAGCTACGTAGGAGACGAA
GCACAAAGCAAGCGAGGAATCCTGACTTTGAAATATCCCATTGAACATGGTATCATCACT
AACTGGGATGATATGGAAAAGATTTGGCATCACACTTTCTATAATGAACTCCGTGTTGCT
CCTGAAGAACATCCAACACTTTTGACTGAAGCTCCTTTGAATCCTAAAGCCAACAGAGAA
AAGATGACCCAAATTATGTTCGAGACCTTCAATGTACCAGCTATGTACGTCGCTATCCAA
GCTGTTCTATCCCTCTATGCATCTGGAAGAACCACCGGCATTGTTTTGGATTCTGGTGAT
GGTGTCTCCCACAATGTTCCCATCTACGAAGGATACGCTCTACCCCATGCAATCGCACGT
TTGGATCTGGCCGGCCGCGATTTAACCGATTATTTAATGAAAATTCTCACAGAAAGAGGA
TATTCTTTCGTTACCACAGCTGAACGTGAAATCGTCCGAGATATCAAAGAAAAATTATGC
TATGTCGCACTAGACTTTGAACAAGAGATGGCAACAGCGGCCTCCTCAACCTCGCTTGAA
AAGAGTTACGAACTTCCGGACGGACAAGTCATCACGATCGGAAACGAAAGATTCCGTTGT
CCGGAAACACTTTTCCAGCCATCGTTCATCGGTATGGAATCTGCTGGTATTCACGAAACA
ACTTACAATTCCATCATGAAATGCGATATTGACATCCGCAAAGATCTTTATGCAAACAAC
GTTCTATCCGGTGGAACCACCATGTATCCTGGTATCGCTGATCGCATGCAAAAAGAAATA
ACTGCTCTTGCACCAAGCACGATGAAAATCAAGATCATCGCTCCTCCCGAACGTTGCTGT
AATTCAAATAGAACACGTCTGACAAACAGATTCAAACGGAAACGGAATAAATAAACGACT
TCTATTCACATTGGATATTTTTATTGCTGGCTTCCATCATAATTATTTACCTATACATGG
CATTTGTTCAGATAATTTTTATAGCAATGATAACAATGAGATTTTTGCACATCCAATATC
CTGGAGGAATCCTTTTATACAGGTAGTT
| PANTHER |
Actin (IPR004000) - T[5-339] 1.2E-237 |
| Pfam |
Actin (IPR004000) - T[6-338] 7.0E-122 |
| SMART |
Actin (IPR004000) - T[8-357] 1.4E-190 |
| PRINTS |
Actin (IPR004000) - T[29-38] 4.8E-58 - T[52-63] 4.8E-58 - T[64-86] 4.8E-58 - T[118-131] 4.8E-58 - T[143-162] 4.8E-58 - T[239-255] 4.8E-58 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[56-66] . |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[107-119] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTA_HUMAN | 97.305 % | 683 | 0 |
| ACTS_HUMAN | 97.305 % | 683 | 0 |
| ACTC_HUMAN | 97.605 % | 684 | 0 |