- Transcript 'Haaura.CG.MTP2014.S9...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S97.g01999.01.t
Possible name(s)
ZIC1; ZIC3; ZIC4
Gene model
Location
S97 [69,747 / 71,157]
Amino acid sequence
Length: 470
>Haaura.CG.MTP2014.S97.g01999.01.p
MAYATAYAFSHQAPTAPFPGYTSTGYENVLPQPMHGITSSASQAALYNPHLNVAPLRNRQ
NIQNPTYINPPPQLKTDAQFFPGIHQPFDYSYRNQYLAYGGGQAQATQKGLTCKWIVSGK
NGEENAITCDREFYSMNQLVDHVTVDHVGGHDQADHTCYWKDCTREKSFQAKYKLVNHIR
VHTGEKPFICLFPNCGKVFARSENLKIHKRTHTGEKPFVCPFDGCDRRFANSSDRKKHTY
THSTSKPYSCKVSGCKKSYTHPSSLRKHLKMHEAEGIKVDSDGGSSDSRMTSPTSSNGSS
SSNTGESGVSPKSPTDNVLTGSISPRSSGSNNGSESNSFAPPNIDLERDLGVCAGVKFEP
QPAFRTNNPFPYYEVQGSTTVSTLPSNSPFYPAAPATQQHLSSIAESVATHTPYNAGYYH
QPSAPTYMMHPQHTPMESDVQAPSIKYLPATEMYESYPSAGYSNHFHQF*
Nucleotide sequence
Length: 1,410
>Haaura.CG.MTP2014.S97.g01999.01.t
ATGGCCTATGCAACAGCTTACGCTTTCTCCCATCAAGCACCGACTGCTCCTTTCCCCGGA
TACACATCAACTGGTTATGAAAACGTATTACCGCAACCAATGCATGGTATCACCTCTTCG
GCATCCCAAGCAGCTCTTTACAATCCTCATCTAAACGTTGCTCCTCTCAGAAATCGACAA
AATATTCAGAATCCAACTTATATCAACCCACCACCTCAGCTTAAAACGGATGCTCAATTC
TTTCCCGGAATTCACCAACCTTTCGACTACTCCTACAGAAACCAGTATTTGGCGTACGGT
GGTGGACAAGCACAGGCTACCCAGAAAGGTCTGACTTGCAAATGGATCGTAAGCGGGAAA
AACGGCGAAGAGAACGCGATAACATGCGACAGAGAGTTTTACAGCATGAACCAACTGGTT
GACCACGTAACCGTTGATCATGTAGGAGGACACGACCAGGCCGACCACACTTGCTACTGG
AAGGACTGCACAAGAGAAAAATCTTTCCAGGCTAAATATAAATTAGTCAACCACATACGA
GTTCATACTGGAGAAAAGCCATTCATCTGTCTGTTCCCCAACTGCGGCAAAGTTTTTGCA
AGAAGCGAGAATTTAAAAATTCACAAACGTACCCATACGGGAGAAAAGCCATTTGTTTGT
CCTTTCGACGGCTGCGATAGAAGATTCGCGAACAGCTCCGACCGTAAAAAACATACCTAC
ACTCACTCTACGTCCAAACCATATTCATGCAAAGTTTCAGGTTGTAAAAAGAGCTACACT
CATCCCAGCTCTCTACGAAAACATTTGAAAATGCATGAAGCCGAGGGGATCAAGGTAGAC
AGCGACGGAGGAAGCAGCGATTCCAGAATGACGTCACCAACATCCAGTAACGGATCGTCG
AGCAGCAACACCGGGGAATCCGGTGTATCACCTAAATCGCCAACAGACAACGTATTAACA
GGATCCATTTCTCCCCGTTCCAGTGGTAGTAACAATGGATCTGAGAGCAATTCCTTTGCT
CCACCAAACATCGATCTCGAAAGAGATCTTGGCGTTTGCGCGGGTGTCAAATTCGAACCG
CAACCAGCTTTTCGAACGAACAACCCATTTCCATATTACGAAGTTCAAGGTTCGACGACA
GTGAGTACTCTTCCGTCAAACTCGCCATTTTATCCTGCAGCACCAGCGACCCAGCAGCAT
TTGTCATCCATCGCAGAATCCGTGGCAACCCACACTCCTTACAACGCTGGATATTACCAT
CAACCATCTGCTCCGACCTACATGATGCATCCGCAGCACACTCCCATGGAGTCTGATGTT
CAAGCTCCTTCAATCAAATATCTTCCAGCTACAGAAATGTATGAATCCTATCCTAGCGCT
GGATATTCCAATCACTTTCATCAGTTTTAA
| SMART |
Znf_C2H2_type (IPR013087) - T[127-147] 260.0 - T[156-182] 5.2 - T[188-212] 0.0043 - T[218-242] 0.0043 - T[248-272] 2.8E-4 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[156-187] 10.907 - T[188-217] 16.249 - T[218-247] 11.739 - T[248-277] 11.468 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[168-224] 6.85E-20 - T[233-273] 1.04E-9 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[190-212] . - T[220-242] . - T[250-272] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZIC4_HUMAN | 59.091 % | 249 | 2.15E-79 |
| ZIC3_HUMAN | 62.814 % | 254 | 1.16E-79 |
| ZIC1_HUMAN | 65.882 % | 241 | 1.07E-74 |
