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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C1.237.v1....' > 
  2. Transcript 'Haaura.CG.MTP2014.S9...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S972.g07254.01.t

Possible name(s)

SNX30; SNX4; SNX7

Gene model

Haaura.CG.MTP2014.S972.g07254

Location

S972 [24,263 / 27,202]

Sequences

Amino acid sequence

Length: 366

>Haaura.CG.MTP2014.S972.g07254.01.p
PLPAKFIMKGMVDRFNIEFVDTRCRALDSFLKRISEHPVISCNEHLKVFLTSEANDFAVH
KKSSKPGILSRVGGTVKSAASAGVSLRSKGRDPEFAELSDHVSNFREKMTVIERVAERLA
VEEKELVEEYKAFAPTFSQWSSTENQVLAPIMTSLSKCIESCAESAMKNVKDHQLHFIPP
IKEYILYSDSIEQVFRRRDVMQMQAEKCQDELQKKTEEIKSIPMADQSYSISAMMGKKPD
DVKQQKEERLHQQVDELTKHYEELSDKLERANGDLRSDIERWKFNKKQDMKQVFIQLADS
HIKNHSECLSTWESLIPIMKEAESIDINLDDYSTAASGCSQDEDEEMTEEQENRDDSSRT
SDEKS*

Nucleotide sequence

Length: 1,098

>Haaura.CG.MTP2014.S972.g07254.01.t
CCGCTACCGGCAAAGTTCATAATGAAAGGAATGGTCGACAGATTTAATATTGAGTTTGTT
GATACAAGATGTCGAGCTCTTGATTCCTTCCTGAAGAGAATTTCTGAACATCCGGTGATA
TCGTGCAACGAACATCTCAAAGTTTTCCTGACTTCAGAGGCAAATGATTTTGCAGTTCAC
AAAAAATCCAGCAAACCCGGCATCTTATCCCGGGTCGGTGGAACCGTCAAGTCGGCTGCC
AGCGCAGGGGTTTCATTGAGGTCGAAAGGTCGGGACCCTGAGTTTGCCGAACTGTCAGAT
CACGTGTCAAATTTCAGAGAAAAAATGACGGTGATTGAGAGAGTTGCTGAAAGATTGGCT
GTCGAAGAAAAAGAACTTGTCGAAGAGTATAAAGCTTTCGCGCCGACATTTTCTCAATGG
TCGTCGACAGAGAACCAAGTCCTAGCGCCGATTATGACATCATTATCGAAATGTATCGAG
TCGTGTGCTGAGTCAGCGATGAAGAATGTGAAGGATCATCAGTTGCATTTCATTCCACCA
ATTAAAGAATACATTCTGTATTCGGATTCGATCGAGCAAGTTTTCAGACGTCGGGACGTG
ATGCAGATGCAAGCGGAGAAATGTCAAGATGAACTTCAGAAGAAAACAGAAGAAATTAAA
TCTATTCCAATGGCTGACCAATCCTATTCCATAAGTGCAATGATGGGGAAGAAACCAGAT
GATGTAAAACAACAAAAAGAAGAACGTCTGCATCAACAGGTCGATGAGTTGACGAAACAT
TACGAAGAGCTGAGCGACAAATTAGAGCGAGCGAACGGAGATCTGAGATCTGATATCGAA
CGTTGGAAGTTCAACAAAAAACAAGATATGAAACAGGTTTTCATTCAACTTGCTGACAGC
CATATAAAAAATCATTCCGAGTGTCTGTCTACTTGGGAATCGTTGATTCCAATCATGAAG
GAAGCAGAGTCAATCGATATAAACTTAGACGATTACAGCACAGCAGCATCCGGATGTTCC
CAGGATGAGGATGAAGAGATGACAGAAGAGCAGGAGAACCGGGATGACTCATCTCGAACA
TCAGATGAGAAATCTTAA

InterProScan

SUPERFAMILY
PX_dom_sf (IPR036871) - T[1-54] 2.49E-9
Pfam
Phox (IPR001683) - T[1-52] 1.2E-5
ProSiteProfiles
Phox (IPR001683) - T[1-57] 10.417
Gene3D
PX_dom_sf (IPR036871) - T[1-65] 1.4E-11
Pfam
Vps5_C (IPR015404) - T[85-316] 2.6E-17
Gene3D
AH/BAR_dom_sf (IPR027267) - T[88-322] 6.5E-44
SUPERFAMILY
AH/BAR_dom_sf (IPR027267) - T[97-215] 1.05E-7 - T[257-321] 1.05E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SNX30_HUMAN 37.072 % 218 2.61E-67
SNX7_HUMAN 36.278 % 199 1.17E-60
SNX4_HUMAN 22.741 % 85.9 1.94E-18