- Transcript 'Haaura.CG.MTP2014.S9...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S967.g07242.01.t
Possible name(s)
ARPC1A; ARPC1B; CIAO1
Gene model
Location
S967 [26,779 / 27,877]
Amino acid sequence
Length: 366
>Haaura.CG.MTP2014.S967.g07242.01.p
MAEVFKFGCQPVCVHAWNANRTQIAICPNNNEVEIHEKSGKQWKLIHTLKEHTGRVTGID
WASKSQRLVTCSSDRNAYVWTVDEQTKEWKPTLVILRINRAATCVKWSPNEDKFAVGSGA
RVISVCYFECENDWWVSKHIKKPIRSTILSIDWHPNNILIAAGSSDFKARVFSGYIKDIE
PKPSSTIWGKKMTFGNVMQEISCDGWVQGVKFSGSGDKMAMVSQDSAIRVVKGGNDAVVV
KASHLPFCDCTWITELSFVAVGHDCNPMLFVTDDNCSSLKFESKLDQVSQGGGAKSMSAM
DRFKMLDKKASTDTQGSEIRTKHKNSITQIVNYGPNKFSTSGMDGNVIIWDVKSLASAIA
GLRIA*
Nucleotide sequence
Length: 1,098
>Haaura.CG.MTP2014.S967.g07242.01.t
ATGGCTGAAGTATTCAAGTTTGGGTGCCAACCCGTATGTGTACACGCTTGGAACGCAAAT
CGTACGCAGATCGCTATTTGCCCCAATAACAACGAGGTTGAGATCCACGAGAAGTCTGGA
AAACAATGGAAGTTGATTCACACTTTGAAGGAACACACAGGCCGTGTTACTGGAATCGAC
TGGGCTTCTAAGAGTCAGAGATTGGTGACTTGTTCGAGTGACCGTAACGCATACGTTTGG
ACAGTGGACGAGCAGACGAAAGAGTGGAAGCCGACACTCGTAATTCTACGTATTAACCGT
GCCGCGACCTGCGTGAAATGGTCGCCAAACGAGGATAAGTTTGCTGTCGGTAGTGGCGCC
AGGGTGATATCGGTCTGCTACTTTGAATGCGAAAATGACTGGTGGGTCAGTAAGCACATA
AAAAAGCCCATACGTTCAACGATCCTCAGCATTGATTGGCATCCAAACAACATCTTGATT
GCGGCCGGATCATCAGATTTCAAGGCTCGTGTGTTTTCAGGATACATCAAGGACATTGAA
CCGAAGCCTTCTTCTACGATCTGGGGGAAAAAGATGACGTTTGGCAACGTCATGCAAGAA
ATTTCCTGTGATGGTTGGGTTCAAGGCGTAAAATTTTCTGGGTCTGGAGATAAGATGGCT
ATGGTTTCCCAGGACAGCGCTATCAGGGTTGTCAAAGGAGGAAACGATGCGGTCGTTGTT
AAAGCCAGCCATCTTCCGTTCTGCGACTGTACCTGGATCACCGAACTGAGCTTCGTCGCT
GTTGGACACGACTGCAACCCAATGTTGTTCGTAACCGACGATAACTGCTCTTCCTTGAAG
TTCGAGAGCAAGCTTGATCAAGTTTCTCAAGGAGGCGGAGCGAAGAGCATGTCTGCAATG
GACCGTTTCAAGATGTTGGACAAGAAGGCATCGACCGACACTCAGGGGTCAGAAATCAGG
ACCAAACACAAGAATTCCATCACGCAGATTGTCAACTATGGTCCGAACAAATTCTCAACG
AGTGGCATGGATGGAAATGTCATCATCTGGGATGTCAAATCTCTGGCATCGGCCATTGCC
GGGCTCCGTATTGCTTGA
| PIRSF |
ARPC1 (IPR017383) - T[1-357] 8.4E-143 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[1-352] 4.6E-141 |
| PANTHER |
ARPC1 (IPR017383) - T[2-363] 3.3E-146 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[10-283] 5.49E-43 - T[311-354] 5.49E-43 |
| SMART |
WD40_repeat (IPR001680) - T[42-81] 3.2E-8 - T[88-127] 4.2 - T[137-173] 0.55 - T[194-232] 10.0 - T[312-351] 3.8 |
| Pfam |
WD40_repeat (IPR001680) - T[43-80] 2.1E-4 - T[143-172] 0.063 - T[322-351] 0.22 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[49-90] 10.812 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[49-90] 11.344 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARC1A_HUMAN | 56.334 % | 417 | 3.89E-146 |
| ARC1B_HUMAN | 55.827 % | 410 | 3.92E-143 |