- Transcript 'Haaura.CG.MTP2014.S9...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S93.g01932.01.t
Possible name(s)
HNRNPL; HNRNPLL
Gene model
Location
S93 [54,713 / 63,381]
Amino acid sequence
Length: 451
>Haaura.CG.MTP2014.S93.g01932.01.p
MASFEGHAVKRQRLNDNGSESAAKEEYDDAEVPEREHKFREPPQQPNKVLLFTILNAIYP
ITTEVMHTICSTCGDVQRIVIFRKRGVQAMSAQRAKASLNGADIYSGCCTLKIEYAKPTR
LNVYKNDDETWDYSESFEQEPGNGAQPSLLGDAPAGYRGSYGAGMGEPSMGGPPMGQRPP
RGMGPRPRPPMVRGHIGPRGRGMMSMRPPRPGIMGPPPQPHNMGDFGGMDDFGMGISQSP
VVMVYGLKPERLNANHLFNILCLYGNILKVKFLKSKPGTAMVQMGDPSSVDRAIQNLSGN
RFFGEKLVLGPSKQMFLTDSGGQISELEDGSPSFVDFSNSRNNRFTTTEQAAKNRIQNPA
KVLHFFNAPLDMDEEKVANLCVDFKVNPPVKFTVFKSRSERSTAGLLEFNDRSEALEALT
MLNHHKMDNPSGRYPYILKLCFSTSNSATN*
Nucleotide sequence
Length: 1,353
>Haaura.CG.MTP2014.S93.g01932.01.t
ATGGCATCCTTCGAAGGTCACGCAGTTAAAAGACAGCGTTTGAACGATAATGGAAGTGAA
AGTGCGGCGAAGGAGGAATATGATGATGCTGAAGTCCCAGAGAGAGAACATAAATTTAGA
GAGCCACCGCAGCAACCAAACAAAGTGTTATTATTTACCATCTTGAATGCCATCTACCCA
ATTACCACAGAAGTTATGCATACTATATGTAGCACATGTGGTGATGTTCAAAGAATTGTC
ATTTTCAGGAAGAGAGGAGTTCAGGCCATGTCAGCTCAACGTGCCAAAGCTTCATTGAAT
GGTGCCGATATTTATTCAGGATGCTGCACGCTGAAAATCGAGTATGCAAAGCCTACTCGA
CTCAATGTCTACAAAAATGATGATGAGACTTGGGATTACAGCGAAAGCTTTGAGCAAGAA
CCAGGTAATGGCGCACAGCCATCACTTCTCGGAGATGCGCCTGCTGGATACAGAGGAAGT
TATGGTGCTGGAATGGGTGAACCAAGTATGGGAGGTCCCCCGATGGGTCAGAGACCACCT
CGAGGCATGGGACCACGGCCACGTCCTCCGATGGTCCGTGGACATATTGGTCCCCGTGGC
AGAGGCATGATGTCAATGCGTCCTCCACGGCCAGGAATAATGGGCCCTCCTCCTCAACCA
CACAATATGGGAGACTTTGGTGGCATGGATGACTTTGGTATGGGCATCAGTCAGAGTCCA
GTCGTCATGGTGTATGGACTGAAACCGGAAAGATTGAACGCAAATCACTTGTTCAACATT
CTCTGTCTATATGGAAACATCCTGAAGGTCAAATTCCTGAAAAGCAAACCTGGTACTGCA
ATGGTACAAATGGGTGATCCGTCTTCTGTTGATCGAGCTATCCAAAATCTGTCTGGAAAT
CGTTTCTTTGGTGAAAAGTTGGTCCTTGGACCTTCGAAGCAGATGTTTCTGACCGACTCT
GGTGGACAAATCAGTGAGCTTGAGGACGGATCACCCAGCTTCGTCGATTTCTCCAATTCG
AGGAACAACAGATTCACCACAACTGAACAAGCTGCAAAGAACAGGATTCAGAATCCAGCA
AAAGTGTTGCATTTCTTTAATGCTCCTTTGGATATGGACGAGGAAAAAGTGGCAAATTTA
TGTGTGGATTTCAAAGTCAATCCACCTGTGAAGTTCACGGTATTCAAGTCTCGTAGTGAA
CGCAGCACTGCTGGTTTGTTGGAGTTTAATGACAGAAGTGAAGCCCTGGAGGCTCTAACC
ATGCTCAATCATCACAAGATGGACAATCCAAGTGGACGATACCCATACATTCTGAAGCTG
TGCTTTTCTACGTCGAACAGCGCCACGAATTAA
| TIGRFAM |
HnRNP-L/PTB (IPR006536) - T[28-446] 8.9E-110 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[44-138] 1.8E-30 - T[236-338] 1.1E-26 - T[349-442] 4.1E-33 |
| SMART |
RRM_dom (IPR000504) - T[49-112] 2.4 - T[241-310] 7.9E-7 - T[362-431] 0.7 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[52-134] 2.85E-10 - T[249-324] 1.24E-12 - T[358-429] 1.24E-12 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[240-314] 10.514 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PTBP3_HUMAN | 30.151 % | 131 | 2.61E-33 |
| HNRPL_HUMAN | 53.589 % | 394 | 1.13E-132 |
| HNRLL_HUMAN | 44.048 % | 328 | 1.91E-107 |