- Clone 'AHC0AAA130YF20' >
- Clone 'cslv016k11' >
- Clone 'csma096h14' >
- Clone 'csga089e16' >
- Transcript 'Haaura.CG.MTP2014.S9...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S933.g07145.02.t
Possible name(s)
CDC40; WDR25; WDR5
Gene model
Location
S933 [22,470 / 28,519]
Amino acid sequence
Length: 584
>Haaura.CG.MTP2014.S933.g07145.02.p
MDGTGMQALCSAYAESDENEDSPDDTVHPEDALLHLKPVCSQNKQLQVVSLAPDVVTKYD
TAGVKVVDHITSKEVLFNPTFEQLHAPEQGPENPFKTRQQLAEKNMLAGFVQEAHIDKFQ
FENQRRTFHSYGYAVDPSVDNTGTEGTGSKMVIGECGEELIKSNNDEKSKTVFEKVKPRE
PDKRKREKCDKPEDIEGFLGPWGGFVDDVKVSKPSEDEKREIDEFLSKRQKRGRKWEDRT
VEEKTTLHVKDPNDYQGRSYLHIPQDVGVNLKSDTPPDKCYLPKTLIHTWSGHTKAVSAI
RLFPKSGHLLLSTSMDCKVKIWEVYNKRRLLRTYNGHAKAVRDACFTNSGKDFITAAYDR
FLKLWDTETGQCKAKFTNKKIPYCVKFNPDEDKQNLFIAGLSDKKIVAWDIRSNEVVQEY
DRHLGAVNTVTFVDNNKRFVSTSDDKSLRVWEWDIPVDFKYIADPGMHSMPSVTLSPNXK
WLGCQSLDNQIMIFDVHGRFRLKQKKKFKGHMVAGYACQMDFSPDQSYVVSGDGDGKVCV
WDWKTTRLFSKFKAHDKVCIGCLWHPHETSKIITCGWDGLIKLW
Nucleotide sequence
Length: 1,752
>Haaura.CG.MTP2014.S933.g07145.02.t
ATGGATGGAACTGGTATGCAAGCTTTGTGCTCCGCTTATGCTGAATCTGATGAAAACGAA
GATTCCCCGGACGACACTGTCCATCCTGAAGATGCATTGCTGCACTTAAAACCAGTGTGT
TCTCAAAACAAACAGCTTCAAGTAGTATCTCTGGCCCCGGATGTCGTAACGAAGTATGAT
ACTGCTGGCGTCAAAGTTGTCGATCACATTACATCAAAAGAAGTACTTTTCAACCCGACA
TTTGAACAGCTTCATGCGCCGGAACAGGGACCAGAAAACCCTTTTAAGACACGACAGCAA
CTCGCTGAAAAGAATATGCTAGCCGGTTTTGTACAAGAAGCTCACATTGATAAATTTCAA
TTTGAAAATCAGAGACGAACTTTTCACAGCTATGGTTATGCCGTTGATCCTTCTGTCGAT
AACACCGGAACAGAAGGTACAGGATCAAAAATGGTTATAGGAGAATGTGGGGAAGAGCTC
ATCAAGAGTAACAATGATGAAAAGAGTAAAACAGTTTTTGAGAAAGTAAAGCCAAGAGAA
CCTGATAAAAGAAAACGAGAAAAATGTGATAAACCTGAAGACATTGAAGGTTTCCTCGGC
CCTTGGGGTGGTTTCGTCGATGACGTGAAAGTATCCAAGCCATCTGAGGATGAAAAAAGA
GAGATAGATGAATTCCTTTCTAAGCGTCAGAAGAGAGGAAGGAAATGGGAGGATCGAACG
GTTGAGGAAAAGACAACACTTCATGTCAAAGATCCAAATGATTACCAGGGAAGATCATAC
TTACATATCCCACAGGATGTTGGCGTCAATCTAAAATCCGATACCCCACCAGATAAATGC
TATCTTCCTAAAACACTCATACATACGTGGAGCGGCCATACTAAGGCAGTGTCTGCGATT
CGTCTCTTCCCAAAATCTGGACATTTGTTGCTCTCAACATCTATGGACTGTAAAGTCAAG
ATCTGGGAGGTGTATAACAAGCGCAGATTGCTGCGGACATACAACGGGCATGCAAAAGCT
GTCAGGGATGCCTGCTTTACTAACAGTGGAAAAGACTTTATTACTGCAGCCTACGATAGA
TTTCTTAAACTGTGGGACACTGAAACAGGACAATGTAAAGCAAAGTTCACAAATAAAAAA
ATCCCTTATTGCGTCAAGTTCAATCCCGATGAAGACAAACAAAATCTGTTTATTGCAGGG
CTTTCAGACAAAAAGATTGTTGCCTGGGACATACGGTCAAATGAAGTTGTTCAGGAATAT
GATCGTCATTTGGGTGCAGTAAACACGGTGACCTTTGTTGACAATAACAAACGTTTTGTT
TCAACATCAGATGACAAGAGTCTCCGTGTTTGGGAATGGGATATTCCTGTGGATTTCAAG
TACATTGCGGATCCTGGCATGCACTCCATGCCATCTGTGACTCTGTCTCCCAACGGNAAG
TGGCTTGGCTGCCAATCATTGGACAATCAGATTATGATATTCGATGTTCATGGTCGATTC
AGGTTAAAGCAGAAGAAAAAATTCAAAGGCCATATGGTGGCTGGATATGCCTGTCAAATG
GATTTCTCTCCTGACCAGTCTTACGTAGTCTCCGGTGATGGTGATGGAAAGGTCTGCGTG
TGGGACTGGAAAACAACTCGCTTGTTCAGTAAATTCAAAGCTCACGATAAAGTTTGTATC
GGCTGCTTATGGCATCCTCACGAAACGTCAAAAATCATAACCTGTGGCTGGGATGGCTTA
ATCAAGCTGTGG
| PANTHER |
PRPF17 (IPR032847) - T[8-584] 2.0E-260 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[268-584] 3.6E-92 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[281-584] 2.56E-69 |
| SMART |
WD40_repeat (IPR001680) - T[283-323] 1.6E-7 - T[327-366] 4.2E-6 - T[369-410] 0.035 - T[413-452] 1.7E-6 - T[458-495] 130.0 - T[501-542] 1.4E-5 - T[545-584] 1.0 |
| Pfam |
WD40_repeat (IPR001680) - T[286-322] 2.7E-5 - T[329-366] 0.001 - T[417-451] 0.008 - T[505-542] 2.7E-5 - T[550-584] 0.043 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[290-584] 40.524 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[290-332] 11.578 - T[334-375] 13.015 - T[420-452] 12.146 - T[520-551] 10.308 - T[552-584] 8.971 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[310-324] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| WDR5_HUMAN | 29.934 % | 131 | 5.32E-34 |
| WDR25_HUMAN | 27.476 % | 154 | 1.24E-40 |
| PRP17_HUMAN | 64.928 % | 761 | 0 |