- Clone 'cien136546' >
- Transcript 'Haaura.CG.MTP2014.S7...' >
- Transcript 'KH2012:KH.L108.24.v3...' >
- Clone 'cima873666' >
- Transcript 'Haaura.CG.MTP2014.S9...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S933.g07145.01.t
Possible name(s)
CDC40; WDR25; WDR5
Gene model
Location
S933 [22,452 / 28,525]
Amino acid sequence
Length: 561
>Haaura.CG.MTP2014.S933.g07145.01.p
ILYFIKMDGTGMQALCSAYAESDENEDSPDDTVHPEDALLHLKPVCSQNKQLQVVSLAPD
VVTKGPENPFKTRQQLAEKNMLAGFVQEAHIDKFQFENQRRTFHSYGYAVDPSVDNTGTE
GTGSKMVIGECGEELIKSNNDEKSKTVFEKVKPREPDKRKREKCDKPEDIEGFLGPWGGF
VDDVKVSKPSEDEKREIDEFLSKRQKRGRKWEDRTVEEKTTLHVKDPNDYQGRSYLHIPQ
DVGVNLKSDTPPDKCYLPKTLIHTWSGHTKAVSAIRLFPKSGHLLLSTSMDCKVKIWEVY
NKRRLLRTYNGHAKAVRDACFTNSGKDFITAAYDRFLKLWDTETGQCKAKFTNKKIPYCV
KFNPDEDKQNLFIAGLSDKKIVAWDIRSNEVVQEYDRHLGAVNTVTFVDNNKRFVSTSDD
KSLRVWEWDIPVDFKYIADPGMHSMPSVTLSPNXKWLGCQSLDNQIMIFDVHGRFRLKQK
KKFKGHMVAGYACQMDFSPDQSYVVSGDGDGKVCVWDWKTTRLFSKFKAHDKVCIGCLWH
PHETSKIITCGWDGLIKLWR*
Nucleotide sequence
Length: 1,683
>Haaura.CG.MTP2014.S933.g07145.01.t
ATTTTATATTTTATAAAAATGGATGGAACTGGTATGCAAGCTTTGTGCTCCGCTTATGCT
GAATCTGATGAAAACGAAGATTCCCCGGACGACACTGTCCATCCTGAAGATGCATTGCTG
CACTTAAAACCAGTGTGTTCTCAAAACAAACAGCTTCAAGTAGTATCTCTGGCCCCGGAT
GTCGTAACGAAGGGACCAGAAAACCCTTTTAAGACACGACAGCAACTCGCTGAAAAGAAT
ATGCTAGCCGGTTTTGTACAAGAAGCTCACATTGATAAATTTCAATTTGAAAATCAGAGA
CGAACTTTTCACAGCTATGGTTATGCCGTTGATCCTTCTGTCGATAACACCGGAACAGAA
GGTACAGGATCAAAAATGGTTATAGGAGAATGTGGGGAAGAGCTCATCAAGAGTAACAAT
GATGAAAAGAGTAAAACAGTTTTTGAGAAAGTAAAGCCAAGAGAACCTGATAAAAGAAAA
CGAGAAAAATGTGATAAACCTGAAGACATTGAAGGTTTCCTCGGCCCTTGGGGTGGTTTC
GTCGATGACGTGAAAGTATCCAAGCCATCTGAGGATGAAAAAAGAGAGATAGATGAATTC
CTTTCTAAGCGTCAGAAGAGAGGAAGGAAATGGGAGGATCGAACGGTTGAGGAAAAGACA
ACACTTCATGTCAAAGATCCAAATGATTACCAGGGAAGATCATACTTACATATCCCACAG
GATGTTGGCGTCAATCTAAAATCCGATACCCCACCAGATAAATGCTATCTTCCTAAAACA
CTCATACATACGTGGAGCGGCCATACTAAGGCAGTGTCTGCGATTCGTCTCTTCCCAAAA
TCTGGACATTTGTTGCTCTCAACATCTATGGACTGTAAAGTCAAGATCTGGGAGGTGTAT
AACAAGCGCAGATTGCTGCGGACATACAACGGGCATGCAAAAGCTGTCAGGGATGCCTGC
TTTACTAACAGTGGAAAAGACTTTATTACTGCAGCCTACGATAGATTTCTTAAACTGTGG
GACACTGAAACAGGACAATGTAAAGCAAAGTTCACAAATAAAAAAATCCCTTATTGCGTC
AAGTTCAATCCCGATGAAGACAAACAAAATCTGTTTATTGCAGGGCTTTCAGACAAAAAG
ATTGTTGCCTGGGACATACGGTCAAATGAAGTTGTTCAGGAATATGATCGTCATTTGGGT
GCAGTAAACACGGTGACCTTTGTTGACAATAACAAACGTTTTGTTTCAACATCAGATGAC
AAGAGTCTCCGTGTTTGGGAATGGGATATTCCTGTGGATTTCAAGTACATTGCGGATCCT
GGCATGCACTCCATGCCATCTGTGACTCTGTCTCCCAACGGNAAGTGGCTTGGCTGCCAA
TCATTGGACAATCAGATTATGATATTCGATGTTCATGGTCGATTCAGGTTAAAGCAGAAG
AAAAAATTCAAAGGCCATATGGTGGCTGGATATGCCTGTCAAATGGATTTCTCTCCTGAC
CAGTCTTACGTAGTCTCCGGTGATGGTGATGGAAAGGTCTGCGTGTGGGACTGGAAAACA
ACTCGCTTGTTCAGTAAATTCAAAGCTCACGATAAAGTTTGTATCGGCTGCTTATGGCAT
CCTCACGAAACGTCAAAAATCATAACCTGTGGCTGGGATGGCTTAATCAAGCTGTGGCGC
TGA
| PANTHER |
PRPF17 (IPR032847) - T[63-559] 4.9E-248 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[243-560] 2.5E-92 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[256-559] 1.26E-69 |
| SMART |
WD40_repeat (IPR001680) - T[258-298] 1.6E-7 - T[302-341] 4.2E-6 - T[344-385] 0.035 - T[388-427] 1.7E-6 - T[433-470] 130.0 - T[476-517] 1.4E-5 - T[520-560] 2.3E-5 |
| Pfam |
WD40_repeat (IPR001680) - T[261-297] 2.6E-5 - T[304-341] 9.5E-4 - T[392-426] 0.0075 - T[480-517] 2.6E-5 - T[525-559] 0.017 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[265-307] 11.578 - T[309-350] 13.015 - T[395-427] 12.146 - T[495-526] 10.308 - T[527-560] 8.871 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[265-560] 40.445 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[285-299] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| WDR5_HUMAN | 29.836 % | 132 | 1.82E-34 |
| WDR25_HUMAN | 27.476 % | 154 | 1.09E-40 |
| PRP17_HUMAN | 65.517 % | 729 | 0 |