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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S9...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S9229.g11365.03.t

Possible name(s)

RDH12; RDH13

Gene model

Haaura.CG.MTP2014.S9229.g11365

Location

S9229 [458 / 1,424]

Sequences

Amino acid sequence

Length: 291

>Haaura.CG.MTP2014.S9229.g11365.03.p
MSEGKVKTVDKGLVNPEIKIPGKTVIITGANTGIGFATAVDLAKREARVIIACRNMEKGE
EAKKKIVEESKSENVVLKELDLSSFESIREFAADINDTESRLDVLINNAGVFMCPQSETK
DGFEMHFGVNHLGPFLLTNLLLDLMKRSAPSRIVTLTSKLCNILFSRELSKNLEGTGVTS
NSLEPGYVRTTLQRHIGTYEHPTFMDRMMIGFYYLSRWSWRTPEEGAQTSIYCSIAPELA
NVSGKYFNDCKQKEESTDAKNDDFAERLWKISAELTGLKQKSEVKEVRQSE

Nucleotide sequence

Length: 873

>Haaura.CG.MTP2014.S9229.g11365.03.t
ATGTCTGAGGGTAAAGTCAAAACTGTGGATAAAGGCCTCGTGAATCCAGAGATCAAAATT
CCTGGCAAAACAGTGATCATAACAGGAGCTAACACTGGAATTGGTTTTGCAACTGCTGTG
GATTTGGCCAAGAGAGAAGCGAGAGTTATTATCGCTTGCAGGAATATGGAAAAGGGAGAA
GAAGCAAAAAAGAAGATTGTTGAAGAATCAAAATCAGAAAATGTTGTTTTGAAGGAACTT
GATCTCTCGTCTTTTGAATCTATTCGTGAATTTGCAGCTGACATCAATGATACCGAATCT
CGACTGGATGTTCTTATTAATAACGCCGGGGTTTTCATGTGCCCCCAATCTGAAACCAAG
GATGGGTTCGAGATGCATTTTGGGGTCAATCATCTTGGGCCTTTTCTGTTGACGAATTTG
CTGTTGGATTTGATGAAGAGAAGTGCACCAAGCAGAATCGTGACCCTCACCTCCAAGCTG
TGTAATATTCTGTTCTCCAGAGAGCTGAGTAAAAACCTTGAAGGTACTGGTGTTACATCA
AATAGTTTGGAGCCGGGCTATGTCAGGACAACTTTACAGAGGCATATTGGTACATATGAA
CATCCAACATTCATGGATCGCATGATGATAGGCTTCTACTACCTCTCAAGATGGTCATGG
AGAACTCCGGAAGAAGGAGCGCAGACTTCAATCTACTGTTCTATTGCTCCAGAGCTTGCC
AACGTCAGCGGAAAGTATTTCAATGACTGTAAACAGAAAGAAGAGTCCACCGATGCGAAG
AATGATGATTTTGCCGAGAGATTGTGGAAAATCAGCGCAGAGCTAACCGGGCTGAAACAG
AAAAGTGAAGTAAAAGAAGTGAGACAGAGTGAG

InterProScan

SUPERFAMILY
NAD(P)-bd_dom_sf (IPR036291) - T[21-252] 7.25E-51
Pfam
SDR_fam (IPR002347) - T[23-161] 5.9E-27
PRINTS
SDR_fam (IPR002347) - T[24-41] 5.2E-14 - T[100-111] 5.2E-14 - T[176-193] 5.2E-14

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RDH11_HUMAN 44.333 % 238 2.41E-77
RDH13_HUMAN 47.855 % 246 1.5E-80
RDH12_HUMAN 45.608 % 237 3.31E-77