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TRANSCRIPT CARD

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  1. Transcript 'Boleac.CG.SB_v3.S16....'
  2. Transcript 'Haaura.CG.MTP2014.S9...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S903.g07040.01.t

Possible name(s)

RABGAP1; TBC1D19

Location

S903 [7,282 / 8,887]

Sequences

Amino acid sequence

Length: 535

>Haaura.CG.MTP2014.S903.g07040.01.p
MNDHENLSFVISQIVSKLKSTTLQSQLRLGAKREAEKGSVTRATMKGDVMEALKNVGWEK
ILRNAVYRELCRTHTGERCLDPEFQKESLQYLKKAQSNWERRILKSMNSMCTELSIPLAR
KRPNDEQRDLLQKWNEMGTDEPDLSHFRPVYAPKDFLEVIVSLQNDNYNAASVGKDGVGP
EVLRTKSSLLGLIQIPLEIPPLNEFQKIFKELNPKLSQNGVDDSPDCFSQNFATERERMA
KKVIDEKQSAVAQYFLRRGCPTGNRGEIWQLALGVSIDSLSILHYEQLKGYVLQHDLLVD
SLIYKDVKLTATNDDYYFVFEDYLYQALLLFSRDTSVLEHFSRSSATPPKSYIKGKWGQE
EYAVTYPPNGVIPFHGFSMYVTPLCYLYAEPIRLYFTFREMYTRYFQRLHTISSHPQGIV
SLCLIFENTLQSLHPKLFHHLVDIGLQPLRIAFKWLVRAFSGYLATYQLHLLWDRIIGYG
DLRLLPLLAVSIFVFRQSNLLSITSAGSAEAALADISTLCVVPLLQMIFFQTKV*

Nucleotide sequence

Length: 1,605

>Haaura.CG.MTP2014.S903.g07040.01.t
ATGAACGATCATGAAAATCTATCGTTTGTTATCTCTCAAATTGTTTCGAAATTGAAATCA
ACAACTCTTCAATCTCAGCTGAGACTCGGAGCAAAACGAGAAGCTGAGAAAGGATCAGTA
ACCAGGGCAACAATGAAAGGTGACGTCATGGAAGCTTTGAAGAACGTGGGGTGGGAAAAA
ATTCTTCGCAATGCCGTGTACAGGGAGCTGTGTCGAACCCACACGGGTGAAAGATGCTTG
GACCCCGAATTCCAAAAAGAAAGTCTACAGTACTTGAAGAAAGCGCAAAGCAACTGGGAA
CGACGGATACTAAAAAGTATGAATAGTATGTGTACTGAATTAAGTATCCCGCTTGCACGT
AAGCGACCGAACGATGAGCAACGTGATTTGCTTCAGAAATGGAATGAGATGGGAACAGAT
GAACCTGATCTAAGTCATTTTCGTCCCGTTTACGCTCCGAAAGATTTCCTCGAAGTTATC
GTTTCGTTACAGAATGATAATTACAACGCTGCTTCGGTTGGAAAAGACGGAGTAGGACCG
GAAGTCTTGAGAACCAAGTCGAGTCTACTCGGATTGATCCAGATTCCACTCGAGATCCCT
CCGCTGAACGAATTTCAAAAAATCTTCAAGGAATTGAATCCAAAATTGAGTCAGAATGGG
GTTGACGATAGCCCCGATTGCTTCTCTCAAAACTTTGCGACAGAACGAGAACGAATGGCG
AAAAAAGTCATCGATGAAAAACAAAGTGCTGTCGCGCAATATTTCTTACGGAGAGGATGT
CCAACTGGAAACCGTGGTGAAATATGGCAGCTAGCACTAGGTGTCTCTATCGATTCTCTC
AGTATTCTCCACTACGAACAGTTGAAAGGTTACGTCCTTCAACACGACCTTCTCGTTGAC
AGTCTGATTTACAAAGACGTAAAATTAACAGCTACAAACGACGATTACTATTTCGTTTTC
GAAGATTATCTTTATCAAGCGTTGCTGCTTTTTTCACGAGACACAAGCGTGCTCGAACAT
TTCTCTAGGAGCAGTGCCACTCCCCCTAAATCTTACATCAAAGGTAAATGGGGGCAGGAA
GAATATGCAGTCACTTACCCACCGAACGGGGTGATCCCTTTTCATGGATTTTCAATGTAC
GTAACTCCCCTGTGTTACCTTTATGCTGAGCCTATTCGTCTTTATTTCACATTCAGGGAA
ATGTATACACGTTATTTCCAGCGCTTACATACGATATCATCTCATCCTCAAGGCATCGTT
TCCCTCTGCTTGATATTCGAAAACACTCTACAATCCCTCCATCCAAAGTTATTTCACCAC
CTCGTAGACATCGGTCTTCAGCCGCTGAGAATCGCATTCAAATGGCTCGTCCGGGCATTC
TCCGGCTACCTAGCGACATACCAGCTGCATTTGTTGTGGGACAGGATCATTGGGTACGGT
GACCTTCGACTTTTACCCCTCCTGGCCGTATCGATTTTTGTGTTCAGGCAATCGAATTTG
CTCTCTATAACATCAGCAGGATCAGCTGAAGCAGCTCTGGCTGATATTTCAACATTATGC
GTTGTTCCGTTGTTGCAAATGATATTTTTTCAAACTAAGGTTTAG

InterProScan

SMART
Rab-GTPase-TBC_dom (IPR000195) - T[256-506] 0.0043
ProSiteProfiles
Rab-GTPase-TBC_dom (IPR000195) - T[259-480] 14.419
Pfam
Rab-GTPase-TBC_dom (IPR000195) - T[376-499] 5.9E-10
SUPERFAMILY
Rab-GTPase_TBC_sf (IPR035969) - T[417-527] 6.41E-15

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TBC19_HUMAN 58.989 % 608 0