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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S8...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S8.g00283.02.t

Possible name(s)

PPP1R8; SLC4A1AP; SNIP1

Location

S8 [112,658 / 115,005]

Sequences

Amino acid sequence

Length: 378

>Haaura.CG.MTP2014.S8.g00283.02.p
MKNKKQRKRSSDDSSSDAEDIRSHKPKKRPRDSEHSRHESKSTEKSRSESRRRSPSGNKK
SSQRRLSPESRRRKSRSASKEDKRTHPRRKDPKHSSGSHGAELTSQQRIDIKKEEDFDIR
QEELRRKRRREGNYQTEHEASNIRVKEEPDSDHDRRTTTQRNQDDRRRQARSRRDEERRN
NEEIRREAWGRREREGGGNAEALAAEEAPIEKEKPNLGLSGALTEDTNSYKGVVIKYNEP
PEARVPKKKWRLYPFKGDEALKVLHLHRQSAYLLGRLRRIADIPIDHPSCSKQHAVLQFR
LVDENRNGRKRRIVKPYIIDLESGNGTFVNNVQIDPRRYVELKEQDIIKFGFSSREYVLL
HDKSDTTEVLAFSVILW*

Nucleotide sequence

Length: 1,188

>Haaura.CG.MTP2014.S8.g00283.02.t
ATGAAGAACAAGAAACAGAGAAAACGGTCTTCGGATGATTCCTCATCAGACGCTGAAGAT
ATTCGCTCTCATAAACCTAAAAAACGACCTCGCGATTCCGAACATTCCAGACACGAATCA
AAATCCACCGAAAAATCTAGATCAGAATCTCGTCGACGTTCACCAAGTGGCAATAAAAAA
TCAAGTCAACGTCGTCTTTCTCCTGAGTCAAGAAGAAGAAAAAGTCGGAGCGCCAGCAAA
GAAGATAAACGTACACATCCCAGAAGAAAAGACCCAAAACATTCCTCTGGTTCACATGGA
GCGGAACTTACTTCTCAACAGAGGATAGATATAAAAAAAGAAGAGGATTTTGACATTAGA
CAGGAGGAATTGAGAAGAAAAAGAAGAAGAGAAGGAAATTATCAAACCGAACATGAAGCT
TCGAATATTCGTGTCAAAGAAGAACCGGATTCAGATCACGATAGAAGAACAACAACACAG
AGAAATCAAGATGATAGGAGGAGACAGGCTAGGAGTAGACGGGATGAGGAGAGGAGAAAC
AATGAAGAAATAAGAAGAGAGGCATGGGGTAGAAGAGAAAGGGAGGGAGGGGGAAATGCA
GAGGCCTTAGCAGCTGAAGAAGCTCCAATAGAAAAGGAAAAACCAAATTTGGGACTTTCT
GGAGCCCTTACTGAAGATACCAATAGTTACAAAGGAGTTGTAATAAAATATAATGAGCCG
CCAGAAGCACGTGTACCAAAAAAGAAATGGAGGCTCTATCCTTTTAAGGGTGACGAAGCA
CTGAAGGTACTTCATCTCCATAGACAGAGCGCTTATCTTCTTGGCAGATTAAGACGTATT
GCTGATATACCGATCGACCACCCGTCATGTTCTAAGCAACATGCCGTACTTCAGTTCAGA
CTCGTTGATGAAAATAGAAATGGAAGAAAGAGGAGAATCGTCAAACCATACATTATTGAT
CTAGAATCAGGCAATGGAACTTTCGTCAACAATGTCCAAATCGACCCAAGAAGATATGTT
GAACTTAAGGAACAGGATATTATTAAATTTGGATTCAGTTCCAGGGAATACGTTCTTCTG
CATGATAAATCGGACACTACCGAGGTATTAGCCTTTTCAGTCATTTTGTGGTGATTGGGA
CCTTAGTTTGAAGTTATCACTTATGACGTTTCACACAAAGCGCAATAG

InterProScan

SUPERFAMILY
SMAD_FHA_dom_sf (IPR008984) - T[239-362] 2.68E-26
CDD
FHA_dom (IPR000253) - T[249-351] 6.25923E-25
SMART
FHA_dom (IPR000253) - T[271-334] 4.7E-13
ProSiteProfiles
FHA_dom (IPR000253) - T[272-334] 10.44
Pfam
FHA_dom (IPR000253) - T[272-351] 8.9E-17

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SNIP1_HUMAN 58.475 % 264 1.81E-85