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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S8...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S8.g00283.01.t

Possible name(s)

PPP1R8; SLC4A1AP; SNIP1

Location

S8 [112,607 / 114,881]

Sequences

Amino acid sequence

Length: 383

>Haaura.CG.MTP2014.S8.g00283.01.p
MKNKKQRKRSSDDSSSDAEDIRSHKPKKRPRDSEHSRHESKSTEKSRSESRRRSPSGNKK
SSQRRLSPESRRRKSRSASKEDKRTHPRRKDPKHSSGSHGAELTSQQRIDIKKEEDFDIR
QEELRRKRRREGNYQTEHEASNIRVKEEPDSDHDRRTTTQRNQGSDDRRRQARSRRDEER
RNNEEIRREAWGRREREGGGNAEALAAEEAPIEKEKPNLGLSGALTEDTNSYKGVVIKYN
EPPEARVPKKKWRLYPFKGDEALKVLHLHRQSAYLLGRLRRIADIPIDHPSCSKQHAVLQ
FRLVDENRNGRKRRIVKPYIIDLESGNGTFVNNVQIDPRRYVELKEQDIIKFGFSSREYV
LLHDKSDTTEIDSEESEENDTD*

Nucleotide sequence

Length: 1,200

>Haaura.CG.MTP2014.S8.g00283.01.t
ATAATATTTTACTAGAAACGAAAGGTTGATATTGTTGTAATTATCATTCAAATGAAGAAC
AAGAAACAGAGAAAACGGTCTTCGGATGATTCCTCATCAGACGCTGAAGATATTCGCTCT
CATAAACCTAAAAAACGACCTCGCGATTCCGAACATTCCAGACACGAATCAAAATCCACC
GAAAAATCTAGATCAGAATCTCGTCGACGTTCACCAAGTGGCAATAAAAAATCAAGTCAA
CGTCGTCTTTCTCCTGAGTCAAGAAGAAGAAAAAGTCGGAGCGCCAGCAAAGAAGATAAA
CGTACACATCCCAGAAGAAAAGACCCAAAACATTCCTCTGGTTCACATGGAGCGGAACTT
ACTTCTCAACAGAGGATAGATATAAAAAAAGAAGAGGATTTTGACATTAGACAGGAGGAA
TTGAGAAGAAAAAGAAGAAGAGAAGGAAATTATCAAACCGAACATGAAGCTTCGAATATT
CGTGTCAAAGAAGAACCGGATTCAGATCACGATAGAAGAACAACAACACAGAGAAATCAA
GGTAGTGATGATAGGAGGAGACAGGCTAGGAGTAGACGGGATGAGGAGAGGAGAAACAAT
GAAGAAATAAGAAGAGAGGCATGGGGTAGAAGAGAAAGGGAGGGAGGGGGAAATGCAGAG
GCCTTAGCAGCTGAAGAAGCTCCAATAGAAAAGGAAAAACCAAATTTGGGACTTTCTGGA
GCCCTTACTGAAGATACCAATAGTTACAAAGGAGTTGTAATAAAATATAATGAGCCGCCA
GAAGCACGTGTACCAAAAAAGAAATGGAGGCTCTATCCTTTTAAGGGTGACGAAGCACTG
AAGGTACTTCATCTCCATAGACAGAGCGCTTATCTTCTTGGCAGATTAAGACGTATTGCT
GATATACCGATCGACCACCCGTCATGTTCTAAGCAACATGCCGTACTTCAGTTCAGACTC
GTTGATGAAAATAGAAATGGAAGAAAGAGGAGAATCGTCAAACCATACATTATTGATCTA
GAATCAGGCAATGGAACTTTCGTCAACAATGTCCAAATCGACCCAAGAAGATATGTTGAA
CTTAAGGAACAGGATATTATTAAATTTGGATTCAGTTCCAGGGAATACGTTCTTCTGCAT
GATAAATCGGACACTACCGAGATCGATTCAGAAGAGAGTGAAGAGAATGATACTGATTGA

InterProScan

SUPERFAMILY
SMAD_FHA_dom_sf (IPR008984) - T[241-364] 2.68E-26
CDD
FHA_dom (IPR000253) - T[251-353] 5.70694E-25
SMART
FHA_dom (IPR000253) - T[273-336] 4.7E-13
ProSiteProfiles
FHA_dom (IPR000253) - T[274-336] 10.44
Pfam
FHA_dom (IPR000253) - T[274-353] 9.1E-17

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SNIP1_HUMAN 60.684 % 270 1.85E-87