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TRANSCRIPT CARD

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  1. Region 'REG00000254' > 
  2. Transcript 'Haaura.CG.MTP2014.S8...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S873.g06954.01.t

Possible name(s)

TPM2; TPM3; TPM4

Gene model

Haaura.CG.MTP2014.S873.g06954

Location

S873 [29,885 / 31,232]

Sequences

Amino acid sequence

Length: 217

>Haaura.CG.MTP2014.S873.g06954.01.p
KMESIKHKMEGLIKEKDEAIEKAIRQENEKKELENKSKELEGEINTITRKITSLEDELDK
VMEKNRESLEKVEIASKVATDSELEVNAQTRRMQLLEEEMARITERLNETVSKLEIAEKA
AEESERGRKVIETRSFTDEETLELQEIQLRDAKAIAEDADRKYEEAETRAEFAERTVDKL
EKTIDYLQEQLYAEKLSYKGISEKLDKTLTDMIDLH*

Nucleotide sequence

Length: 651

>Haaura.CG.MTP2014.S873.g06954.01.t
AAAATGGAATCCATCAAACACAAAATGGAAGGACTCATCAAGGAGAAAGATGAAGCCATC
GAGAAGGCAATCCGACAGGAAAACGAAAAGAAAGAATTGGAAAACAAATCCAAGGAACTC
GAAGGAGAAATCAACACGATCACTCGCAAGATCACTTCGCTGGAAGATGAACTCGATAAA
GTTATGGAGAAAAATAGAGAATCCCTGGAAAAAGTCGAAATCGCTTCCAAAGTTGCTACT
GATTCCGAATTGGAAGTCAATGCCCAAACTCGTCGCATGCAACTGCTTGAAGAGGAAATG
GCCCGAATTACCGAGCGATTGAACGAAACTGTTTCAAAGCTCGAAATTGCTGAAAAAGCA
GCTGAAGAAAGTGAACGAGGCCGAAAAGTTATTGAAACACGATCATTCACCGATGAAGAG
ACTTTAGAGTTGCAAGAAATTCAACTTCGTGATGCTAAGGCGATCGCTGAAGACGCCGAT
CGCAAATATGAAGAAGCTGAAACCAGAGCTGAATTTGCTGAAAGAACAGTTGATAAACTT
GAAAAGACCATCGATTACTTGCAAGAACAATTGTACGCCGAGAAGTTGTCTTACAAGGGA
ATCAGCGAAAAACTCGACAAGACTCTTACCGACATGATCGACCTCCACTAA

InterProScan

Pfam
Tropomyosin (IPR000533) - T[67-167] 2.6E-25
PRINTS
Tropomyosin (IPR000533) - T[85-102] 2.2E-21 - T[121-141] 2.2E-21 - T[146-174] 2.2E-21

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TPM3_HUMAN 40.141 % 139 1.41E-40
TPM1_HUMAN 41.549 % 162 1.89E-49
TPM2_HUMAN 47.938 % 142 1.78E-41