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TRANSCRIPT CARD

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  1. Region 'REG00000150'
  2. Transcript 'Harore.CG.MTP2014.S1...'
  3. Transcript 'Phmamm.CG.MTP2014.S1...'
  4. Transcript 'KH2012:KH.L92.4.v1.A...'
  5. Transcript 'Haaura.CG.MTP2014.S8...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S849.g06881.03.t

Possible name(s)

LOXL2; LOXL3; LOXL4

Location

S849 [5,152 / 8,705]

Sequences

Amino acid sequence

Length: 471

>Haaura.CG.MTP2014.S849.g06881.03.p
LQAETAMGNGYSITFIFVTFSLSALDLASAFTEVRLRAGVSNWDGRIEVKRNERWGTVCD
LGFDKTAADIVCRELGFAGAEELRLRSHYGAARGPIWVSNVKCNGNETHFSQCEYTSINI
NYNPQRYGNVNRQCSSNELAGVLCIKPTINQNDFDMIRFEPDKDEMSDSELVEMQVDGVW
YRICDISWDITDAIVACRQIGMYAAKMSLIPVVVGDFQTVVELDCAGYEDSIQRCPHVLR
DINCQNYAAVACSPDAPDISIEIPELERSITLISKENKKLTCAKEEGCVSTSALNIDLNS
TVGHRKLLTFSSYVQNFGTADFRPPTPKGSWHRHKCHKHYHSITDFATYELLQPDGVKVA
SGHKVSFCLQDSSCVHGYHKKYACSNRVKDGNQGISIGCSDHYGRYLDCQWIDVTDVSPG
IYKLKISSNPYKYVPELDYTNNIVVCDVEIGEHKGKGRNCVWGKFFKTESK

Nucleotide sequence

Length: 1,413

>Haaura.CG.MTP2014.S849.g06881.03.t
TTACAGGCGGAAACAGCAATGGGGAATGGTTATTCAATCACATTCATCTTTGTCACGTTC
TCTCTGTCTGCACTTGATTTGGCTTCAGCATTTACAGAAGTGAGACTTCGGGCAGGTGTC
AGCAATTGGGATGGAAGAATTGAAGTGAAAAGGAACGAAAGATGGGGAACTGTTTGCGAT
CTCGGATTCGATAAGACTGCGGCAGATATCGTTTGTAGAGAACTTGGATTCGCAGGAGCT
GAAGAGCTGCGTTTGAGATCACATTATGGCGCTGCTCGTGGACCAATATGGGTTAGCAAC
GTTAAGTGCAATGGTAATGAAACACATTTCTCTCAATGTGAATATACTTCAATTAACATC
AACTATAATCCACAACGTTATGGCAACGTAAATAGACAATGTTCATCGAATGAACTCGCT
GGAGTGCTGTGCATCAAGCCTACAATCAACCAAAATGATTTTGACATGATTAGATTTGAA
CCTGATAAGGATGAGATGTCAGATTCGGAACTGGTTGAAATGCAAGTTGATGGAGTTTGG
TACAGGATCTGCGACATATCGTGGGATATAACGGATGCAATTGTTGCTTGCCGTCAGATT
GGAATGTATGCAGCAAAGATGTCCTTGATCCCGGTTGTAGTAGGTGATTTTCAGACTGTG
GTGGAACTTGACTGCGCTGGATATGAAGATTCTATTCAGAGATGTCCACATGTACTCAGA
GACATAAATTGTCAAAATTATGCTGCAGTTGCTTGCTCACCAGATGCTCCAGACATCAGT
ATTGAAATTCCAGAGCTTGAACGATCAATTACTTTGATCTCGAAGGAAAATAAAAAACTG
ACATGTGCAAAGGAGGAAGGATGTGTGTCTACATCTGCTCTAAACATTGATTTGAATAGC
ACAGTCGGACACAGAAAGCTCCTCACCTTCTCGTCATATGTTCAGAACTTTGGAACGGCT
GATTTTAGACCCCCAACACCGAAGGGATCCTGGCACAGACACAAATGCCACAAGCATTAC
CACAGCATCACTGATTTCGCAACTTATGAACTTCTTCAACCAGACGGAGTGAAGGTAGCG
TCCGGACACAAAGTCAGTTTTTGTCTTCAAGACAGTAGTTGTGTTCATGGATATCACAAG
AAGTATGCTTGTTCAAATAGAGTGAAAGATGGAAATCAAGGGATCTCAATTGGATGCTCT
GATCATTACGGAAGATATTTGGATTGTCAATGGATTGATGTCACTGATGTAAGTCCAGGG
ATATATAAACTGAAGATCAGTTCAAATCCATATAAATATGTTCCCGAGTTGGACTATACG
AACAATATCGTTGTGTGTGATGTTGAAATTGGAGAACACAAAGGGAAGGGAAGAAACTGT
GTCTGGGGTAAGTTTTTTAAAACTGAATCCAAA

InterProScan

Gene3D
SRCR-like_dom_sf (IPR036772) - T[27-151] 3.5E-30 - T[162-258] 4.7E-13
SUPERFAMILY
SRCR-like_dom_sf (IPR036772) - T[31-147] 2.35E-28 - T[171-254] 8.24E-15
SMART
SRCR-like_dom (IPR017448) - T[34-145] 2.4E-31 - T[166-253] 4.7E-6
ProSiteProfiles
SRCR (IPR001190) - T[34-145] 24.959 - T[157-253] 15.638
PRINTS
SRCR (IPR001190) - T[34-50] 2.7E-10 - T[53-64] 2.7E-10 - T[68-78] 2.7E-10 - T[99-113] 2.7E-10
ProSitePatterns
SRCR (IPR001190) - T[39-76] .
Pfam
SRCR (IPR001190) - T[39-144] 2.4E-22 - T[171-253] 3.8E-10
Pfam
Lysyl_oxidase (IPR001695) - T[257-460] 5.9E-70
PRINTS
Lysyl_oxidase (IPR001695) - T[266-290] 2.6E-25 - T[313-334] 2.6E-25 - T[335-355] 2.6E-25 - T[409-428] 2.6E-25 - T[429-446] 2.6E-25

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
LOXL2_HUMAN 37.862 % 287 5.57E-89
LOXL3_HUMAN 37.251 % 281 9.86E-87
LOXL4_HUMAN 36.364 % 278 1.48E-85