Aniseed - Transcript Card

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S849.g06881.02.t

Possible name(s)

LOXL2; LOXL3; LOXL4

Gene model

Haaura.CG.MTP2014.S849.g06881

Location

S849 [5,152 / 8,064]

Sequences

Amino acid sequence

Length: 306

>Haaura.CG.MTP2014.S849.g06881.02.p
MSDSELVEMQVDGVWYRICDISWDITDAIVACRQIGMYAAKMSLIPVVVGDFQTVVELDC
AGYEDSIQRCPHVLRDINCQNYAAVACSPDAPDISIEIPELERSITLISKENKKLTCAKE
EGCVSTSALNIDLNSTVGHRKLLTFSSYVQNFGTADFRPPTPKGSWHRHKCHKHYHSITD
FATYELLQPDGVKVASGHKVSFCLQDSSCVHGYHKKYACSNRVKDGNQGISIGCSDHYGR
YLDCQWIDVTDVSPGIYKLKISSNPYKYVPELDYTNNIVVCDVEIGEHKGKGRNCVWGKF
FKTESK

Nucleotide sequence

Length: 1,134

>Haaura.CG.MTP2014.S849.g06881.02.t
ATGGTAATGAAACACATTTCTCTCAATGTGAATATACTTCAATTAACATCAACTATAATC
CACAACGTTATGGCAACGTAAATAGACAATGTTCATCGAATGAACTCGCTGGAGTGCTGT
GCATCAAGCCTACAATCAACCAAAATGATTTTGACATGGTAAACCAATATTTCCATTATA
AATTTGTAGATTAGATTTGAACCTGATAAGGATGAGATGTCAGATTCGGAACTGGTTGAA
ATGCAAGTTGATGGAGTTTGGTACAGGATCTGCGACATATCGTGGGATATAACGGATGCA
ATTGTTGCTTGCCGTCAGATTGGAATGTATGCAGCAAAGATGTCCTTGATCCCGGTTGTA
GTAGGTGATTTTCAGACTGTGGTGGAACTTGACTGCGCTGGATATGAAGATTCTATTCAG
AGATGTCCACATGTACTCAGAGACATAAATTGTCAAAATTATGCTGCAGTTGCTTGCTCA
CCAGATGCTCCAGACATCAGTATTGAAATTCCAGAGCTTGAACGATCAATTACTTTGATC
TCGAAGGAAAATAAAAAACTGACATGTGCAAAGGAGGAAGGATGTGTGTCTACATCTGCT
CTAAACATTGATTTGAATAGCACAGTCGGACACAGAAAGCTCCTCACCTTCTCGTCATAT
GTTCAGAACTTTGGAACGGCTGATTTTAGACCCCCAACACCGAAGGGATCCTGGCACAGA
CACAAATGCCACAAGCATTACCACAGCATCACTGATTTCGCAACTTATGAACTTCTTCAA
CCAGACGGAGTGAAGGTAGCGTCCGGACACAAAGTCAGTTTTTGTCTTCAAGACAGTAGT
TGTGTTCATGGATATCACAAGAAGTATGCTTGTTCAAATAGAGTGAAAGATGGAAATCAA
GGGATCTCAATTGGATGCTCTGATCATTACGGAAGATATTTGGATTGTCAATGGATTGAT
GTCACTGATGTAAGTCCAGGGATATATAAACTGAAGATCAGTTCAAATCCATATAAATAT
GTTCCCGAGTTGGACTATACGAACAATATCGTTGTGTGTGATGTTGAAATTGGAGAACAC
AAAGGGAAGGGAAGAAACTGTGTCTGGGGTAAGTTTTTTAAAACTGAATCCAAA

InterProScan

SMART	SRCR-like_dom (IPR017448) - T[1-88] 4.7E-6
ProSiteProfiles	SRCR (IPR001190) - T[1-88] 15.081
Gene3D	SRCR-like_dom_sf (IPR036772) - T[2-93] 2.9E-13
SUPERFAMILY	SRCR-like_dom_sf (IPR036772) - T[6-89] 7.72E-15
Pfam	SRCR (IPR001190) - T[7-88] 2.0E-10
Pfam	Lysyl_oxidase (IPR001695) - T[92-295] 1.9E-70
PRINTS	Lysyl_oxidase (IPR001695) - T[101-125] 4.2E-26 - T[148-169] 4.2E-26 - T[170-190] 4.2E-26 - T[244-263] 4.2E-26 - T[264-281] 4.2E-26

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
LOXL2_HUMAN	39.423 %	219	1.36E-65
LOXL3_HUMAN	39.172 %	216	8.71E-65
LOXL4_HUMAN	37.7 %	214	4.38E-64