- Transcript 'Haaura.CG.MTP2014.S7...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S7.g00238.01.t
Possible name(s)
CDC23; CDC27; TTC6
Gene model
Location
S7 [24,803 / 31,254]
Amino acid sequence
Length: 1,020
>Haaura.CG.MTP2014.S7.g00238.01.p
MTILQEPIKMYIFDIQAAIWHAVNHYAYNDAIFLAERLFAEVGSSEALFLLATAYYRLGK
PKVAQLLLDKHGVTSPECKLLYAQTAWDLEEYAKIERILSSELGLPGSNAKGVNQTKGQS
YMSLKISEIQSEFGESACFALGLLGRVYLRTERHDRAELCLMASLKLNPFLWMSFELLCQ
AGKKPDPDEVFNVNNLHSFSGCRSHIPSVSPINGSNQQHLQQPHTILRRKSISKDLELEN
SAPDAAMMLRLPRHTQNRSYLTETTQQHSAPVPMSVTPSSAFSMKSGFPTPMGQKSQTPV
TSAKSVLLNSEHLVTPPPSRVDFAGIISTSGSLKPLPSSAASQRDTTIGSPGSEFLRSTP
AGDHRSDWDSSIDSFSCIASSAMRRSTRTQQLIGRSLIGGPTSMSPLTPSFGVLPLAETP
SPATERALSMVTPVDTALQGDVMAPTKKMMTRQSRKPHSADLGLNQGPGKLNFSSENSHR
LTQSNANTTNLSQLSTPSNQQMAPVRRSTRIFANAANTIKENTKTGRSKFHQPKSALKRN
ARSRQANTKSVRDLSEEISKADTQSCEKQLHSNAVTNSQSHALMLATQKSAVEGLMSLLR
DMAYAFSALCQYDCREAISSFNNLPHHHKNTGWVLSSLGRAHFELTEYNEAANIFKELHL
SAPHYFRGLEIYSTTLWHLKREVELSALAHDMKNLDQLCPETWCAVGNCFSLQRDHTSAA
SFFHRAVQLDSNCSYAYTLLGHELGLTDDLDGALTCYRNAVRCNPRHYNAWYGIGTIYYK
QEKFKIAELHFRKALAIHPHSSVLLCHIGIAQHALKQTTLALRTLNAAVEMEPRNPLCKF
HRATVLFAAERYQDALEELLELMQIVPKESLVYFLLGKVYKKLRKNHLAVISFSWAMELD
PKGANNQIKEAIDKQNLPDDDEQSEEETGEGSILDSSLLDTDNNTVERQDGGLFQESDIQ
QDFQDRRRQHDSSGDLLHHDSDESDLKGISCKAAIWSKETQHTRLYGNGCNFGPWNFFR*
Nucleotide sequence
Length: 3,067
>Haaura.CG.MTP2014.S7.g00238.01.t
ATGACTATACTGCAAGAGCCAATAAAGATGTATATTTTCGACATTCAGGCAGCAATATGG
CATGCTGTCAATCATTATGCTTACAATGATGCGATATTCTTAGCAGAGAGACTTTTTGCT
GAAGTTGGTTCGAGCGAAGCACTGTTCCTTCTCGCAACTGCCTATTACCGCCTAGGTAAA
CCGAAAGTGGCTCAGTTGCTATTGGACAAGCATGGGGTGACGTCTCCAGAATGTAAATTA
CTGTATGCTCAAACAGCTTGGGATTTGGAAGAATACGCTAAAATAGAGCGAATTTTGTCA
AGCGAATTGGGACTGCCAGGTTCCAATGCTAAAGGAGTAAATCAGACGAAGGGTCAATCC
TACATGTCATTAAAGATTTCAGAAATTCAGTCAGAATTTGGAGAATCTGCATGTTTTGCA
TTAGGACTGTTGGGACGCGTTTATCTCCGAACAGAAAGGCATGATCGTGCCGAACTGTGT
CTTATGGCAAGCCTCAAACTCAACCCTTTCTTGTGGATGTCATTCGAGCTTTTGTGTCAG
GCTGGAAAAAAGCCTGATCCAGACGAAGTATTCAATGTTAATAATCTTCATAGTTTTTCT
GGCTGTCGTTCACATATTCCTTCAGTGTCTCCAATTAATGGGTCAAACCAACAACATCTG
CAGCAACCGCATACGATACTACGAAGAAAAAGCATTTCAAAGGATTTAGAATTAGAAAAC
AGCGCTCCAGATGCAGCCATGATGTTGCGTTTGCCGAGGCACACTCAGAATCGTAGTTAC
CTCACCGAGACCACTCAACAGCATTCCGCCCCTGTTCCAATGTCAGTCACTCCGTCTTCA
GCGTTTTCTATGAAATCTGGCTTCCCGACTCCTATGGGCCAGAAGTCGCAAACTCCTGTG
ACATCTGCTAAATCTGTTTTACTGAATTCAGAGCACTTGGTTACGCCTCCTCCGTCCAGG
GTCGACTTTGCAGGCATTATAAGTACAAGCGGAAGCCTGAAACCTCTGCCGTCTTCAGCT
GCATCACAGAGAGATACTACAATCGGATCTCCTGGCAGTGAATTTTTAAGGTCTACACCA
GCTGGAGATCACCGCAGTGACTGGGATAGTTCCATTGACTCCTTTTCTTGCATCGCCAGC
TCTGCTATGCGCCGGTCAACCAGAACACAACAGCTCATAGGCAGAAGTCTTATTGGCGGA
CCGACGTCCATGAGTCCATTGACGCCGAGTTTTGGAGTGCTGCCATTGGCAGAGACACCC
AGTCCAGCTACTGAAAGGGCTTTGTCCATGGTGACTCCAGTAGATACAGCTCTTCAGGGT
GATGTTATGGCACCTACTAAGAAAATGATGACTAGGCAGTCGAGAAAACCTCATTCTGCC
GACTTAGGGTTGAATCAGGGTCCAGGGAAATTGAACTTTTCATCAGAAAACAGTCACAGG
CTGACACAGAGCAACGCTAACACAACAAATTTGAGCCAGCTTTCAACCCCGTCCAATCAA
CAGATGGCACCGGTCCGAAGAAGCACGAGAATTTTTGCCAATGCTGCAAATACCATCAAG
GAGAACACAAAGACGGGGAGGTCAAAGTTTCACCAGCCGAAGTCAGCGCTCAAGCGTAAT
GCCAGGTCCAGACAAGCTAATACCAAATCGGTGAGGGATTTATCTGAGGAGATCAGCAAA
GCTGACACACAATCCTGTGAAAAACAGCTACATTCGAATGCAGTGACAAACAGTCAGTCA
CACGCCCTAATGCTGGCCACTCAGAAATCAGCAGTTGAAGGTCTGATGTCTTTGCTGCGA
GATATGGCCTACGCCTTCTCTGCCCTCTGTCAGTATGATTGTCGAGAAGCAATATCCAGC
TTTAATAATTTACCTCATCACCATAAAAACACAGGCTGGGTGCTGTCTTCCCTTGGCCGA
GCTCATTTTGAATTGACGGAGTATAATGAGGCAGCAAACATCTTCAAGGAGCTTCATCTT
TCAGCACCACATTATTTCAGAGGTTTAGAAATTTACAGCACAACCCTGTGGCATTTGAAG
CGAGAAGTTGAGCTTTCTGCCCTCGCTCACGACATGAAAAATTTAGATCAGCTGTGCCCA
GAGACATGGTGCGCCGTGGGAAATTGCTTTTCTTTGCAACGAGACCATACTTCAGCAGCC
AGCTTCTTTCACCGTGCCGTCCAGCTAGACTCCAACTGTTCCTACGCATACACCCTTCTG
GGTCATGAGCTTGGACTTACAGATGACCTCGATGGTGCCTTGACCTGCTATAGAAATGCA
GTTCGCTGTAATCCACGCCACTACAATGCTTGGTATGGCATCGGCACTATATACTACAAG
CAAGAAAAATTCAAAATAGCGGAGCTCCACTTCAGAAAGGCACTTGCTATACATCCCCAT
AGTTCAGTTTTACTCTGTCATATAGGTATAGCCCAGCATGCTCTTAAGCAGACAACGCTC
GCTTTACGTACACTCAATGCCGCCGTTGAAATGGAGCCACGTAACCCACTATGCAAGTTT
CACAGAGCAACCGTCTTGTTCGCAGCTGAGCGCTACCAAGATGCCCTGGAAGAGCTGCTT
GAGTTAATGCAAATTGTGCCAAAAGAAAGTCTCGTGTATTTTTTGTTGGGCAAGGTTTAC
AAAAAGTTGCGCAAGAACCACTTGGCGGTCATCAGTTTTTCTTGGGCCATGGAGCTGGAC
CCAAAAGGAGCAAATAACCAGATCAAGGAGGCAATTGACAAACAAAACTTACCGGATGAC
GATGAACAGTCCGAGGAGGAAACGGGAGAAGGTAGCATATTGGACTCCAGTCTTTTAGAT
ACAGATAATAACACTGTCGAACGACAGGATGGAGGTTTGTTTCAGGAAAGTGATATTCAG
CAGGATTTTCAAGACAGGCGGCGGCAGCACGACAGCAGTGGAGACCTGCTTCATCACGAC
AGCGATGAAAGTGATTTGAAAGGAATAAGTTGTAAAGCAGCTATTTGGAGCAAGGAAACA
CAGCACACCAGGTTATACGGTAATGGATGCAATTTTGGTCCTTGGAATTTTTTTCGTTGA
TATTTAG
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[13-194] 1.6E-40 - T[588-663] 9.9E-22 - T[666-797] 4.4E-45 - T[798-901] 9.0E-32 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[45-103] 1.23E-17 - T[136-179] 1.23E-17 - T[588-659] 1.23E-17 - T[700-903] 7.97E-38 |
| SMART |
TPR_repeat (IPR019734) - T[45-78] 440.0 - T[138-171] 1.3 - T[632-665] 27.0 - T[700-733] 0.018 - T[734-767] 0.021 - T[768-801] 5.8E-6 - T[802-835] 2.7 - T[836-869] 47.0 - T[870-903] 0.29 |
| ProSiteProfiles |
TPR_repeat (IPR019734) - T[138-171] 6.933 - T[632-665] 7.08 - T[700-733] 8.673 - T[734-767] 8.85 - T[768-801] 11.623 - T[802-835] 7.434 - T[836-869] 6.284 - T[870-903] 9.647 |
| Pfam |
TPR_repeat (IPR019734) - T[141-169] 0.028 - T[872-902] 0.1 |
| ProSiteProfiles |
TPR-contain_dom (IPR013026) - T[632-665] 6.835 - T[700-903] 38.87 |
| Pfam |
TPR_1 (IPR001440) - T[769-800] 2.3E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CDC23_HUMAN | 30.435 % | 112 | 2.07E-25 |
| CDC27_HUMAN | 50 % | 560 | 0 |
