Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Clone 'cicl084o22' > 
  2. Transcript 'KH2012:KH.C1.653.v1....' > 
  3. Transcript 'Haaura.CG.MTP2014.S7...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S76.g01683.01.t

Possible name(s)

NPLOC4

Gene model

Haaura.CG.MTP2014.S76.g01683

Location

S76 [61,573 / 67,612]

Sequences

Amino acid sequence

Length: 569

>Haaura.CG.MTP2014.S76.g01683.01.p
MIIRVQSKDGTKRIEASSSETVLSFLSKVGKEFGLDVGSSWRIYQDRSRKSELKKNSKSK
LSSKKLKHGDMCYLYFTDGINVAGDEAEEESEQGPAVKVTEDDIDIELWKQDGRIPQGSR
GSGGGMFKIDDLPLNPWDESYLQEKEIKFKSFHAHMRQQTSGVDKGKYLKLESTRTACKL
DSGEGKRSLLDFPTAITLNQQKFRHVDNIMFENREIADRFLDYWRSTGAQRVGFMYGRYT
QHKEVPLGIKAEVCAIYEPPQENSTNALRLLEDPHEKIITKIACTLGLQKLGWIVTDLVA
EDRTKGTVKHFRDAETHFMTAEECILAGEFQNQTPNPCRLAKDGYYGSKFVTVIVSGDKT
NQISFEGYQXXXXXXXXXXXXXXIPTIDAPELGYIRESTQDLYVPDVYYKMKDEYGNEIT
KLARPLPLAYLLLDVPAAFAIEAQYTCSRPKDSFVIANRQSLGEIQNLEKLAAQLDKSSA
DGFLVTMSDFHLLVYLAKMENFQIGDALDPLLEAIKEKNNDKALEWSKNAAWVSLQHDMQ
QQASVQGASGMDMDPELREAIARSLMET*

Nucleotide sequence

Length: 1,707

>Haaura.CG.MTP2014.S76.g01683.01.t
ATGATCATTCGAGTGCAGTCTAAAGATGGAACGAAACGTATCGAAGCGTCGTCTTCGGAA
ACCGTGCTTTCTTTCCTGAGCAAAGTCGGAAAAGAATTCGGGCTGGACGTCGGCAGCAGC
TGGAGAATCTATCAAGACAGAAGCAGAAAATCGGAACTGAAAAAAAATTCAAAATCAAAA
TTGAGTTCGAAAAAATTAAAACATGGCGACATGTGTTATCTTTACTTCACAGACGGTATC
AATGTTGCTGGTGACGAAGCAGAGGAGGAATCAGAGCAAGGACCAGCAGTCAAGGTTACC
GAGGATGACATCGACATTGAACTCTGGAAACAAGATGGTCGGATCCCACAGGGAAGCAGA
GGTTCAGGAGGAGGGATGTTTAAAATTGATGATTTGCCGTTGAATCCATGGGACGAATCT
TACCTGCAAGAAAAAGAAATTAAATTCAAATCGTTTCATGCCCACATGAGACAGCAGACG
TCCGGGGTGGATAAAGGAAAATATCTCAAACTTGAATCGACAAGAACTGCCTGCAAACTT
GACTCGGGCGAAGGGAAGAGGTCTTTGCTTGACTTCCCGACCGCTATAACTCTGAATCAG
CAAAAGTTCCGGCACGTTGACAACATAATGTTTGAAAACAGAGAGATAGCGGACAGATTT
CTTGATTATTGGAGAAGCACAGGTGCTCAGAGAGTTGGATTCATGTATGGACGATATACA
CAACATAAGGAAGTTCCCCTCGGTATCAAAGCAGAAGTTTGTGCAATATACGAACCCCCA
CAAGAAAACTCAACAAATGCATTAAGATTACTGGAGGATCCCCACGAAAAAATCATAACT
AAAATTGCTTGCACTCTTGGGCTGCAGAAACTTGGTTGGATTGTGACAGACTTGGTCGCT
GAAGATAGAACAAAGGGCACTGTAAAGCATTTCCGTGATGCGGAAACCCATTTTATGACA
GCTGAGGAATGTATATTGGCAGGCGAATTCCAGAATCAAACCCCAAACCCATGTAGACTG
GCAAAAGATGGTTATTATGGATCAAAATTTGTCACTGTTATTGTTTCTGGTGATAAAACT
AATCAGATCTCATTTGAAGGTTATCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNATACCGACGATAGATGCCCCGGAACTCGGTTACATTCGAGAAAGCACTCAG
GATTTGTACGTGCCGGACGTTTATTATAAAATGAAAGACGAATATGGGAATGAAATCACA
AAACTTGCGAGACCTTTACCACTGGCATATCTCCTGCTTGATGTGCCAGCCGCATTCGCA
ATCGAGGCTCAGTACACATGCAGTCGTCCGAAAGATTCTTTTGTTATAGCGAACAGACAA
TCTCTGGGCGAGATACAAAACTTAGAAAAATTGGCTGCTCAGTTGGATAAATCGAGCGCG
GATGGATTTCTAGTGACGATGTCTGATTTCCATTTGCTCGTGTATTTGGCAAAGATGGAA
AATTTTCAAATCGGGGACGCACTTGATCCCTTGCTAGAAGCCATTAAGGAAAAAAATAAT
GACAAGGCATTGGAATGGAGTAAAAATGCTGCTTGGGTATCTCTACAACATGATATGCAG
CAGCAGGCCTCGGTGCAAGGTGCCTCTGGCATGGATATGGATCCTGAACTACGTGAAGCA
ATTGCACGTAGTTTAATGGAAACTTAA

InterProScan

Pfam
Npl4_Ub-like_dom (IPR024682) - T[1-75] 9.5E-20
SUPERFAMILY
Ubiquitin-like_domsf (IPR029071) - T[1-76] 2.89E-8
PIRSF
Npl4 (IPR016563) - T[1-543] 2.1E-136
Pfam
NPL4_Zn-bd_put (IPR007716) - T[99-228] 8.0E-26
CDD
NPL4_C (IPR007717) - T[197-496] 3.4656E-105
ProSiteProfiles
MPN (IPR037518) - T[209-346] 18.314
Pfam
NPL4_C (IPR007717) - T[231-536] 4.2E-98

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NPL4_HUMAN 46.583 % 508 3.79E-175