Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Haaura.CG.MTP2014.S2...' > 
  2. Transcript 'Boschl.CG.Botznik201...' > 
  3. Transcript 'Boschl.CG.Botznik201...' > 
  4. Transcript 'Cisavi.CG.ENS81.R26....' > 
  5. Transcript 'Haaura.CG.MTP2014.S7...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S75.g01672.01.t

Possible name(s)

NKX6-1; NKX6-2; NKX6-3

Gene model

Haaura.CG.MTP2014.S75.g01672

Location

S75 [100,007 / 101,579]

Sequences

Amino acid sequence

Length: 236

>Haaura.CG.MTP2014.S75.g01672.01.p
MAAGSSGTGPFLFGGNHAAAAAMSALHAAASSCMTEANVPVQSFYAHPGFQTQMTNDKLK
QMHSPPSGTPFGINDILGRSKNTRRNMESLSSPTPNYGQVITNTSHSAAMAHAAAAAAIY
LGSGDLSNGSMVGLSNNVGLSTGTQYPKPLAELPGRSPIYWPGILQEDWRDKLARGAPQS
NVCLDKCGKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKV

Nucleotide sequence

Length: 708

>Haaura.CG.MTP2014.S75.g01672.01.t
ATGGCAGCTGGTTCATCTGGCACAGGACCTTTTCTTTTTGGAGGAAATCACGCAGCCGCT
GCGGCAATGAGCGCACTTCACGCGGCTGCAAGCTCCTGCATGACCGAGGCTAATGTGCCC
GTGCAAAGTTTTTACGCTCACCCGGGCTTCCAAACGCAAATGACCAATGACAAATTGAAA
CAGATGCACAGCCCACCTTCGGGTACCCCTTTTGGAATAAATGATATTTTGGGCAGGTCA
AAAAATACTAGACGTAATATGGAATCTTTGTCCAGTCCTACCCCAAACTACGGGCAGGTT
ATCACAAACACTTCTCATAGCGCTGCTATGGCACATGCTGCCGCGGCTGCAGCAATTTAC
CTCGGTAGCGGAGACCTAAGCAATGGGAGCATGGTTGGACTTTCTAACAATGTAGGCTTA
TCAACTGGTACGCAATATCCGAAGCCATTAGCAGAACTACCGGGCCGATCACCGATATAC
TGGCCTGGGATTTTACAGGAAGATTGGAGAGATAAACTGGCTCGAGGTGCGCCCCAATCG
AATGTATGCTTGGATAAATGCGGAAAGAAAAAGCACACCCGGCCGACGTTCTCGGGCCAA
CAGATATTTGCACTGGAAAAGACATTTGAACAGACGAAGTATCTTGCGGGACCAGAACGA
GCAAGACTAGCATATTCACTTGGAATGACTGAATCACAAGTGAAGGTA

InterProScan

SUPERFAMILY
Homeobox-like_sf (IPR009057) - T[180-236] 1.88E-12
ProSiteProfiles
Homeobox_dom (IPR001356) - T[188-236] 11.888
SMART
Homeobox_dom (IPR001356) - T[190-236] 0.0015
Pfam
Homeobox_dom (IPR001356) - T[191-236] 1.6E-10
CDD
Homeobox_dom (IPR001356) - T[191-236] 1.0937E-11

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NKX62_HUMAN 53.179 % 156 4.81E-47
NKX61_HUMAN 78.723 % 154 2.71E-45
NKX63_HUMAN 46.821 % 103 9.97E-27