- Clone 'cien231118' >
- Clone 'citb2g22' >
- Clone 'cien55886' >
- Transcript 'KH2012:KH.C5.22.v1.A...' >
- Transcript 'Haaura.CG.MTP2014.S7...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S745.g06515.01.t
Possible name(s)
AFG3L2; SPG7; YME1L1
Gene model
Location
S745 [18,625 / 22,515]
Amino acid sequence
Length: 673
>Haaura.CG.MTP2014.S745.g06515.01.p
MLLFPMFQLSHFPKRLPVIICNLNTNSRTFALSCVRNKSCTGERRCLKLYFIPNNSLSTA
FCRNAYLNLLKRQITPLYVNNDFFRTKAGATTTTEKMDKKQQQNGMSESEITEQVESLTK
TFLLNPKEAMTVRMGLMEGLRMNSSRENLENRLWKIIKEVSVALFVVGVVIVIXXXXXXX
XPMKSLMNIYKKDYKAEAPDVSFDDVKGIDEVKQELVEVVEFLRDPERFTNLGAKLPKGM
LLIGPPGTGKTLLARAIAGEAGVPFYYASGSEFDEIFVGVGSSRIRKLFADARENSPCII
FIDEIDACGNKRSSSPLQPYARQTINQLLQEMDGFDEKEGILVLGATNMGNVLDKALTRP
GRFDTEIIVLPPDIKGRKEILELYTNKIIHGNNLDLEHIACLTGGMTGADLANLVNLAAI
RAAQLKKSVVEITDFEFALDRIRMGPELSSRVPTKAELDVTAFHEAGHALVAYYTPNTMP
IYKATIRQRGRALGHVAQMPTREDEHSSTSAKLLAQIDVAMGGRVAEEIMKGKDHVSTGA
SSDLQSATRIAYEFICTYGMSENLGFVAYDYEKASPVTKRLIESEVNKVLEKSYNKAKDL
LTTHSDQHRLLAKALIKYETLTLEEIKALLTAQNINIVSKTRNSQTKQIPLVSPVIPSTR
DPINDPTVADIM*
Nucleotide sequence
Length: 2,185
>Haaura.CG.MTP2014.S745.g06515.01.t
ATGCACCTCGCGCTGCTGTCATTCAATATTCAGAGGATAATATTTTGTAATAAGAAAACG
AAATTCATTGGTTAGTAGAGCCTGGATTTTAATAGTAGCGCTCAGTTCAGTACATGTATC
CCAATCTGGCAGCCCTGTTATATTGCCTGATCATTGCAAAAGCACTATGCTATTATTTCC
TATGTTCCAACTCTCTCATTTTCCGAAGCGTCTTCCTGTGATTATATGTAACTTGAACAC
AAATTCGAGGACATTTGCATTATCATGTGTACGAAACAAAAGTTGCACTGGGGAGAGACG
ATGCTTGAAACTGTATTTCATCCCAAATAACTCTTTATCAACAGCGTTCTGCAGGAATGC
GTATCTTAACCTGCTGAAACGTCAAATCACACCTCTGTATGTCAACAATGATTTCTTTAG
AACGAAAGCTGGTGCTACTACCACCACCGAAAAAATGGATAAGAAGCAACAACAGAACGG
CATGTCGGAGAGCGAGATCACAGAGCAAGTGGAATCCTTAACGAAAACTTTTCTACTCAA
TCCGAAAGAAGCCATGACGGTGAGAATGGGATTGATGGAAGGATTGCGTATGAATTCGTC
TAGGGAGAACTTAGAAAACAGGCTGTGGAAAATAATAAAGGAAGTGTCCGTCGCACTATT
CGTCGTGGGTGTGGTAATAGTTATCTTNNNNNNNNNNNNNNNNNNNNNNCCTATGAAATC
TCTGATGAATATTTACAAAAAAGATTACAAAGCCGAAGCTCCGGATGTTAGTTTCGATGA
TGTCAAAGGAATCGATGAAGTCAAACAAGAGCTCGTGGAGGTTGTCGAATTTCTTCGTGA
CCCCGAACGATTTACGAACCTTGGTGCGAAACTGCCTAAAGGAATGTTGTTAATCGGTCC
ACCAGGAACAGGAAAAACCTTATTGGCAAGAGCCATAGCTGGAGAGGCCGGAGTTCCATT
TTACTATGCGTCCGGATCGGAATTTGATGAAATATTTGTGGGTGTCGGAAGCTCAAGAAT
TCGCAAACTGTTTGCTGACGCGAGGGAAAATTCTCCTTGCATCATATTCATTGACGAAAT
AGACGCATGTGGAAATAAGAGATCGTCCTCGCCTCTTCAGCCTTACGCAAGACAGACTAT
CAATCAACTGTTACAAGAGATGGATGGCTTTGATGAAAAGGAAGGAATTCTTGTACTCGG
GGCAACAAATATGGGAAATGTATTGGATAAGGCGTTAACACGCCCGGGACGATTCGATAC
CGAGATTATTGTTTTGCCGCCCGATATCAAAGGTAGAAAAGAGATTCTAGAATTGTATAC
GAATAAAATCATTCATGGCAACAATTTAGATCTGGAACATATAGCTTGTCTAACTGGTGG
TATGACCGGAGCTGATCTGGCAAATTTAGTAAATCTTGCTGCGATAAGAGCTGCACAGCT
GAAGAAATCAGTTGTAGAAATTACTGATTTTGAATTCGCTCTTGACAGGATTCGTATGGG
ACCAGAATTGAGTAGTCGTGTTCCAACTAAGGCAGAATTAGATGTAACTGCCTTTCATGA
GGCTGGACACGCTTTAGTTGCCTACTATACTCCCAACACAATGCCCATTTACAAAGCAAC
CATAAGACAGCGTGGACGTGCATTAGGTCATGTAGCTCAGATGCCTACAAGAGAAGATGA
ACATAGTTCTACATCTGCTAAGCTTCTGGCTCAGATCGATGTCGCCATGGGAGGCAGAGT
TGCTGAAGAAATTATGAAAGGAAAAGATCACGTTTCAACAGGAGCATCTTCTGATCTTCA
GTCAGCTACGAGAATCGCGTACGAGTTCATCTGTACTTATGGAATGTCGGAAAATCTAGG
GTTTGTCGCTTATGATTACGAGAAAGCCAGTCCGGTAACTAAACGTTTGATTGAATCGGA
GGTTAATAAAGTATTAGAGAAATCTTACAACAAAGCCAAAGACCTTCTAACAACACATTC
GGATCAACACAGACTGTTGGCGAAAGCTTTGATAAAATACGAAACTTTAACGCTGGAAGA
GATAAAAGCTCTCTTAACTGCACAGAACATAAATATTGTTTCCAAAACTAGGAATTCTCA
GACTAAGCAGATTCCTCTTGTTTCCCCAGTTATCCCGTCTACTCGAGATCCAATAAATGA
CCCGACTGTGGCGGATATTATGTAA
| TIGRFAM |
FtsH (IPR005936) - T[163-630] 2.4E-159 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[197-442] 1.87E-63 |
| SMART |
AAA+_ATPase (IPR003593) - T[236-373] 1.8E-23 |
| Pfam |
ATPase_AAA_core (IPR003959) - T[240-368] 1.8E-38 |
| ProSitePatterns |
ATPase_AAA_CS (IPR003960) - T[341-359] . |
| Pfam |
Peptidase_M41 (IPR000642) - T[433-629] 1.4E-58 |
| SUPERFAMILY |
Peptidase_M41-like (IPR037219) - T[453-632] 2.88E-55 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SPG7_HUMAN | 39.462 % | 322 | 2.83E-99 |
| AFG32_HUMAN | 41.928 % | 339 | 4.63E-106 |
| YMEL1_HUMAN | 56.036 % | 505 | 4.58E-170 |