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- Transcript 'Haaura.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S684.g06241.01.t
Possible name(s)
KCNQ1; KCNQ3; KCNQ5
Gene model
Location
S684 [8,743 / 21,434]
Amino acid sequence
Length: 715
>Haaura.CG.MTP2014.S684.g06241.01.p
MTASILTKPTSTYMALELSTSAPVMQLDQDAAAAATADDKSEVTFVSKISEDDLHHLHEV
RFSKSATYDRSLEEAPYIDEWIDMESDDDRDYPKNTVMVKTFPNGQDGSSNEDGDRTTNR
LTDSMTQGGREERKSINDEIWRHSTLCDYLRDQDVESRKERRKSNQPKIRCKTKFQNQVF
NFLERPTGVKCFIYHMIVFMMVLVCLIFSVLTTVDERNDSHVNILLIMESCVVAFFGVEY
CVRLWAAGAIGKYKGFWGRFYFARKPICVIDLFVVLASAIVLLSSRNGNVFATSAIRGIR
FLQILRMLHMDRQGGTWRLLGSVVYIHRQELITTLYIGFLALILSSYFVYLAEKPDPNEE
KGNQTFRIDNINRFENYADALWWGVVTVTTIGYGDYVPKTWLGKVVASCFSIFAISFFAL
PAGILGSGFALKVQQKQRQKQFNKQIPAAAHLIQAVWRCYSTRPGSRCVATWNLYALPNQ
MRHESKSSSNVNGTTQRTSSTMLSRRELHKTKGNVAKHKLAARASSSCSWDDVIDEVHCN
NDDQECCNPESLPNSYKNVVRAARFLIFFIKKKDFHQCRKPYDVRDVFEQYSHGYVNITV
RLKELQRRLDQTIGKPTSFMDASDSSSQDRQNITAGFRLRRLEQKTITRASQTPRRKRED
LTKFRINGIEKVPYYGIQLPDCNNGSVWRVRQFNYEQAYESFLQGTSKPFALPNC
Nucleotide sequence
Length: 2,145
>Haaura.CG.MTP2014.S684.g06241.01.t
ATGACGGCGAGTATTTTAACCAAACCAACATCGACATACATGGCCTTGGAACTTTCAACG
AGCGCACCAGTCATGCAACTGGATCAAGATGCTGCTGCAGCAGCAACCGCAGACGACAAA
AGTGAAGTGACTTTCGTAAGTAAGATTTCCGAAGACGATCTTCATCACTTGCACGAAGTT
AGGTTTTCCAAATCCGCTACATACGACAGGTCCCTGGAAGAGGCCCCATACATTGATGAA
TGGATAGATATGGAGTCAGACGACGATCGCGATTATCCTAAAAATACTGTGATGGTTAAA
ACTTTCCCAAATGGACAGGATGGAAGTTCCAATGAAGACGGAGATCGAACAACAAACCGC
CTCACTGATTCGATGACCCAAGGTGGACGGGAAGAACGCAAAAGTATTAACGATGAGATC
TGGAGGCATTCGACGTTGTGTGACTATTTACGCGACCAAGATGTGGAATCGCGCAAGGAA
AGGCGAAAAAGTAATCAACCGAAAATAAGATGTAAAACTAAATTTCAAAATCAAGTGTTC
AACTTTCTGGAGAGACCCACCGGTGTAAAGTGCTTTATTTATCATATGATCGTATTTATG
ATGGTTCTAGTTTGTCTTATATTCAGCGTTCTAACGACCGTGGATGAACGTAACGATAGT
CACGTAAACATCCTTCTAATCATGGAATCGTGCGTCGTTGCTTTCTTCGGAGTCGAATAC
TGCGTGCGGTTGTGGGCAGCTGGAGCGATAGGAAAATACAAAGGATTTTGGGGAAGGTTC
TACTTCGCGAGGAAGCCGATATGTGTGATTGATCTCTTTGTGGTGCTTGCTTCAGCTATC
GTCTTGCTGTCAAGTCGTAACGGGAATGTTTTTGCCACGTCTGCTATCAGAGGGATACGA
TTCCTTCAGATATTGCGGATGCTACACATGGATAGACAAGGTGGAACGTGGAGATTACTA
GGGAGCGTGGTGTATATCCATAGACAAGAACTAATTACCACACTGTACATCGGCTTTTTA
GCCTTGATTCTTTCTTCATACTTCGTTTACCTTGCTGAAAAGCCCGATCCTAACGAAGAA
AAGGGCAATCAGACGTTCAGAATCGACAATATAAACAGATTTGAAAACTATGCAGACGCA
CTGTGGTGGGGCGTGGTTACTGTCACAACTATCGGTTACGGAGATTACGTCCCAAAAACG
TGGCTCGGAAAAGTAGTGGCTTCATGTTTCTCAATATTCGCCATTTCGTTTTTTGCCCTG
CCTGCGGGGATACTCGGATCCGGTTTCGCTCTCAAGGTCCAACAAAAACAGCGACAAAAG
CAATTCAACAAGCAAATTCCTGCTGCGGCTCATTTAATTCAAGCAGTATGGCGGTGTTAT
TCAACACGACCAGGTTCAAGATGTGTGGCAACCTGGAATTTGTACGCGTTGCCTAACCAA
ATGCGACATGAATCTAAGTCGTCTAGCAACGTGAACGGCACAACTCAGAGAACTAGCTCG
ACAATGTTATCGCGACGAGAGCTTCATAAAACGAAAGGAAATGTGGCCAAGCACAAACTG
GCCGCCCGTGCTTCTTCGTCATGCAGTTGGGATGACGTCATTGATGAAGTCCACTGCAAC
AACGACGACCAAGAGTGTTGTAATCCAGAAAGTTTACCAAACTCATACAAAAACGTTGTT
CGAGCGGCTCGATTTCTGATATTTTTTATCAAAAAAAAGGACTTTCATCAATGTCGGAAA
CCATATGACGTTCGCGATGTTTTTGAGCAATATTCTCACGGATACGTTAACATCACCGTA
AGATTAAAAGAACTTCAAAGGAGACTCGATCAAACTATCGGAAAGCCAACGTCATTTATG
GATGCTTCCGACTCGTCTTCTCAAGACAGGCAAAATATAACTGCAGGCTTCAGGCTGAGA
AGACTAGAGCAGAAGACGATTACCCGCGCTTCACAAACTCCCAGAAGAAAAAGAGAAGAC
TTGACAAAGTTCCGAATTAACGGCATAGAAAAAGTTCCATATTACGGTATACAGCTGCCT
GACTGTAACAACGGTAGTGTATGGCGTGTACGTCAGTTCAACTACGAACAAGCATACGAG
TCCTTTTTGCAGGGGACATCCAAACCATTTGCACTTCCCAACTGT
| PANTHER |
VG_K_chnl (IPR028325) - T[152-647] 5.6E-203 |
| Pfam |
Ion_trans_dom (IPR005821) - T[194-432] 1.0E-26 |
| PRINTS |
VG_K_chnl (IPR028325) - T[227-250] 1.6E-12 - T[374-396] 1.6E-12 - T[403-429] 1.6E-12 |
| PRINTS |
K_chnl_volt-dep_KCNQ (IPR003937) - T[235-254] 4.0E-23 - T[255-274] 4.0E-23 - T[317-336] 4.0E-23 |
| Pfam |
K_chnl_volt-dep_KCNQ_C (IPR013821) - T[521-628] 5.3E-19 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| KCNQ1_HUMAN | 50 % | 499 | 2.05E-168 |
| KCNQ3_HUMAN | 41.414 % | 376 | 1.09E-118 |
| KCNQ5_HUMAN | 42.604 % | 395 | 2.31E-125 |