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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S6...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S66.g01529.01.t

Possible name(s)

CSTF1; NOL10; WDR83

Location

S66 [37,435 / 41,504]

Sequences

Amino acid sequence

Length: 685

>Haaura.CG.MTP2014.S66.g01529.01.p
MQVSNPNNIKIYNLSCGKSLPQFISDYKRRNLQKNDVNLRRRIELIQDFEMPTVSTKVGM
TEDGNYIFVAGTYKPRIRCYDVHDLSMKFERCLDSEVITFHTLSEDYSKIAMLLNDRYIE
FHSQEGRWYRVRMPKFGRDMSYHSANCDLYLVGAGSEIYRLNLDHGKFYESFKTRASELN
VCELSSSHHLLAVGTIDGKVECFDPRSRQSVGILDCAVSIADESKSIEKCPQITSLRFKD
PLHIAVGTSQGQVLLYDIRTNSPYAVKDHYYDLPIHSVDFNKENEVVLSSDQRCVKIWDD
KTGKAVTAIETKHDINDMHLVRNSGLMFLANESPKIQTYFVPMLGPAPKWASFLDNLTEE
LEENPTQELYDDYKFVTTKELEELGLTHLIGSSLLKAYMHGYFLDMRLYNKAKTIANPFA
YDEYRKKKIRERMEENRVNRVQVKKLPKVNKGFAQRLISQAEEEKLNSGKKKKLKKEASS
LLSDSRFKSMFENPDFEINEESDEFQLIKPVLSKQHEKEKRKRRETNEGKVTVDIECLLN
LSSEYKGQDDLSDEEMERKYKEEMRLAHRKIYNKKHIEMQNRIEKDKGTTLQPTLYQLKS
NNKFSTFGDFSKMNQKRLKQDRKKLRTTLEERIQQEEDNTPSGARKAVGAKQMTFRIQKR
RTIKGQKISQALAEDKSETKLLPEV

Nucleotide sequence

Length: 2,055

>Haaura.CG.MTP2014.S66.g01529.01.t
ATGCAAGTATCTAATCCAAACAATATTAAAATATACAACCTGAGCTGCGGGAAATCCCTT
CCTCAATTCATATCAGACTATAAGAGGCGTAATCTTCAGAAGAACGATGTTAATCTTCGA
AGGAGAATCGAACTTATACAAGATTTTGAAATGCCAACAGTGAGCACCAAAGTTGGGATG
ACAGAAGATGGAAATTATATTTTTGTGGCTGGTACATACAAGCCGAGGATTCGATGCTAC
GATGTTCATGATTTGTCAATGAAATTTGAAAGGTGTCTAGATTCTGAAGTGATTACATTT
CATACTCTCTCTGAGGATTATTCGAAGATCGCAATGCTGCTAAATGATCGATATATCGAA
TTCCATTCTCAAGAGGGCAGGTGGTATCGAGTGCGAATGCCAAAATTCGGAAGGGATATG
AGCTACCATTCAGCGAACTGCGATTTGTATCTCGTTGGAGCTGGGTCAGAAATATATCGC
TTGAATCTTGATCATGGAAAGTTTTATGAATCATTTAAGACAAGGGCTTCTGAGCTAAAT
GTGTGTGAACTGAGCAGTTCTCATCACTTACTAGCTGTAGGAACGATAGATGGAAAAGTG
GAATGTTTTGATCCCAGGTCAAGACAATCAGTTGGAATTCTGGATTGTGCTGTGTCCATA
GCAGACGAGAGTAAAAGCATCGAGAAATGCCCCCAGATAACATCACTTAGATTCAAAGAT
CCATTGCATATTGCAGTTGGTACAAGCCAAGGACAGGTTCTTTTGTATGACATACGTACA
AATTCTCCGTATGCTGTGAAGGATCACTATTACGATCTTCCTATTCATTCTGTTGACTTC
AACAAAGAAAACGAGGTTGTTTTGTCTTCAGATCAAAGATGTGTCAAAATCTGGGATGAT
AAAACAGGAAAAGCTGTGACAGCGATCGAAACAAAGCACGACATAAATGACATGCACTTG
GTCCGAAATTCAGGTCTTATGTTTCTCGCAAACGAAAGTCCAAAAATTCAAACATACTTT
GTTCCAATGCTGGGACCTGCACCGAAGTGGGCATCTTTCTTGGACAACCTAACAGAGGAA
CTGGAGGAGAATCCTACACAGGAGCTTTATGATGATTATAAGTTTGTAACAACGAAAGAA
TTGGAAGAACTGGGTCTCACTCATCTGATTGGTTCCTCGCTACTGAAAGCCTACATGCAT
GGATATTTCCTAGACATGAGGCTGTATAATAAAGCCAAAACAATAGCAAATCCATTTGCG
TATGACGAATACAGGAAAAAGAAAATCAGGGAAAGAATGGAAGAGAACAGAGTCAATCGT
GTTCAAGTTAAGAAATTACCGAAAGTAAACAAAGGCTTTGCTCAACGTCTCATAAGCCAA
GCTGAAGAAGAAAAGCTAAATAGTGGGAAGAAGAAAAAACTAAAGAAAGAAGCAAGCTCT
TTGTTGTCAGACAGTCGATTCAAATCAATGTTTGAAAATCCTGATTTCGAAATAAACGAA
GAATCTGACGAGTTCCAATTGATCAAACCCGTCTTGTCAAAGCAACACGAAAAGGAAAAA
AGAAAGCGACGGGAAACGAATGAAGGCAAAGTTACGGTAGATATAGAATGCTTATTAAAT
CTTTCGAGTGAATATAAAGGTCAGGATGATTTATCTGATGAAGAGATGGAAAGAAAGTAC
AAAGAAGAAATGAGACTCGCGCATAGGAAGATATATAACAAGAAACATATAGAAATGCAA
AATCGTATAGAGAAAGATAAAGGAACAACTCTACAACCGACACTCTATCAGCTGAAGTCC
AATAACAAATTCAGTACTTTTGGGGACTTTTCCAAAATGAATCAGAAGAGGCTCAAACAG
GATAGGAAGAAATTACGCACAACTCTTGAAGAAAGAATACAACAGGAAGAAGATAATACG
CCAAGCGGAGCAAGGAAAGCAGTTGGTGCTAAACAGATGACATTTAGAATCCAAAAGAGA
AGAACGATTAAAGGTCAGAAGATCAGCCAAGCACTTGCAGAGGACAAAAGTGAAACAAAA
CTTCTTCCAGAAGTG

InterProScan

Gene3D
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[33-220] 7.4E-9 - T[221-342] 8.5E-9
SUPERFAMILY
WD40_repeat_dom_sf (IPR036322) - T[38-337] 1.86E-28
SMART
WD40_repeat (IPR001680) - T[165-204] 8.0 - T[223-257] 56.0 - T[260-299] 6.0
Pfam
NUC153 (IPR012580) - T[484-511] 3.7E-10

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NOL10_HUMAN 51.709 % 702 0