- Transcript 'Cisavi.CG.ENS81.R16....' >
- Transcript 'KH2012:KH.C1.1022.v1...' >
- Region 'REG00000662' >
- Region 'REG00001594' >
- Transcript 'Haaura.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S659.g06140.01.t
Possible name(s)
FOXA2; FOXB1; FOXB2
Gene model
Location
S659 [21,834 / 23,574]
Amino acid sequence
Length: 580
>Haaura.CG.MTP2014.S659.g06140.01.p
MPRPGRDSYGDQKPPYSYIALTAMAIQSSPDKMMSLSEIYKYIMERFPFYRKNTQRWQNS
LRHNLSFNDCFMKVPRRADRPGKGSLWTLHPTCGQMFENGSFLRRRKRFKVAGCDEEHDA
EFTRPFVSEDSPRQGIRRYDPAHVSPNAAGHTFLGVAKHHHTMIDPNKIAAMMQPNIMAA
AGPWIAQQSHSSNGVPFLPRPGFTMPPPHALAASAYFRSAIAEYQAALAGSILAKHRQQV
SPTQVHPISAMTMLPSAHASMMALPHLSAIKSLAQASEARDAIIKHNLLNNQKLNMQHEV
QDLTTGKRREREEDKKMKKSTVSFSIDNIMKGSFSKEADSTQKDTYYRTTNTPSSESTSP
RKNFETEKRGKKRSLSPDSTTSTPKRTNMEEDRRHLAFSGRNVMHGGQAIDFQDIWSQSK
PTNHINEIASISPDSNQVSSALENLYRYAARACNRMQLEKSYRENTALPISHSSFSSTST
MGECSPKPFPSSPKEQPTSSSSEDDSPMSYRRINSDEKRKRTNGIDSSGKDNPMASTSDS
ESANSRETEHYYQAKSRSLPENSLFKAETTSPVSTMIAA*
Nucleotide sequence
Length: 1,740
>Haaura.CG.MTP2014.S659.g06140.01.t
ATGCCTCGTCCAGGAAGAGATTCTTACGGTGACCAGAAACCGCCTTACTCTTACATCGCC
TTGACGGCAATGGCAATCCAATCATCTCCTGATAAAATGATGAGTTTGTCCGAGATTTAC
AAGTACATTATGGAGAGGTTCCCATTTTACAGAAAGAACACCCAGCGTTGGCAAAATTCG
CTACGTCACAACCTATCATTTAACGATTGCTTCATGAAAGTACCCAGGCGAGCCGACCGA
CCAGGAAAAGGCAGCTTATGGACACTTCATCCGACCTGTGGACAAATGTTCGAAAATGGA
AGTTTCCTAAGAAGAAGAAAACGCTTTAAGGTAGCTGGATGCGACGAAGAACATGATGCT
GAATTCACGAGGCCGTTTGTTTCGGAAGATAGCCCACGCCAAGGTATTAGAAGATACGAC
CCAGCTCACGTGAGTCCCAATGCAGCGGGACATACTTTTTTAGGCGTGGCAAAACATCAT
CACACTATGATAGATCCCAATAAAATAGCAGCTATGATGCAACCAAATATAATGGCTGCA
GCCGGGCCATGGATAGCCCAACAGTCTCATTCTTCAAATGGCGTACCGTTTCTACCGAGG
CCTGGATTCACAATGCCGCCTCCTCACGCTTTGGCCGCATCAGCCTACTTCCGATCGGCA
ATTGCCGAATACCAGGCCGCGCTTGCTGGGTCAATATTGGCAAAGCATAGGCAGCAGGTT
TCACCAACACAAGTTCATCCCATATCAGCTATGACTATGTTACCATCAGCACATGCATCT
ATGATGGCATTACCTCATCTATCGGCGATAAAATCCCTTGCGCAAGCATCCGAAGCCAGG
GACGCGATTATTAAACACAACCTTTTGAATAATCAGAAACTGAATATGCAACATGAAGTT
CAAGATTTAACTACCGGGAAGAGACGGGAAAGGGAAGAAGATAAAAAAATGAAGAAAAGC
ACAGTGTCATTCTCCATAGATAATATAATGAAAGGGTCGTTTTCAAAGGAGGCAGATTCT
ACGCAAAAAGATACCTATTATCGTACTACTAATACACCCAGTTCCGAATCTACTTCGCCA
AGGAAGAACTTTGAGACTGAGAAAAGAGGTAAAAAGAGATCTCTATCTCCTGACTCCACA
ACTTCGACTCCGAAACGAACAAACATGGAGGAGGATCGTAGACATTTGGCTTTCTCAGGT
AGAAACGTTATGCACGGAGGACAAGCGATTGATTTTCAAGATATTTGGAGTCAAAGCAAA
CCGACTAACCACATAAATGAAATTGCAAGTATTTCGCCCGATTCCAATCAAGTCTCCAGC
GCTCTTGAAAATCTGTATCGTTACGCCGCACGCGCTTGTAACAGAATGCAACTGGAAAAG
AGCTACAGGGAAAACACTGCGTTACCTATAAGTCACTCCTCTTTCTCAAGTACATCGACA
ATGGGAGAATGTTCTCCAAAACCGTTCCCGTCCTCTCCCAAAGAACAACCAACGTCTTCG
AGCAGCGAAGATGATTCTCCCATGTCTTACAGAAGGATCAACTCGGATGAGAAAAGAAAG
AGAACCAACGGAATTGATAGTTCTGGAAAAGACAATCCAATGGCGTCAACTTCGGATAGT
GAAAGTGCTAACAGCCGAGAAACTGAACACTACTACCAGGCGAAATCAAGATCACTGCCA
GAAAATAGCTTGTTCAAAGCAGAGACCACCTCGCCCGTATCGACGATGATAGCAGCGTAA
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[11-112] 8.5E-45 |
| SMART |
Fork_head_dom (IPR001766) - T[11-101] 7.9E-60 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[12-107] 1.79E-39 |
| Pfam |
Fork_head_dom (IPR001766) - T[13-97] 3.4E-36 |
| ProSitePatterns |
TF_fork_head_CS_1 (IPR018122) - T[13-26] . |
| PRINTS |
Fork_head_dom (IPR001766) - T[13-26] 6.3E-22 - T[34-51] 6.3E-22 - T[57-74] 6.3E-22 |
| ProSiteProfiles |
Fork_head_dom (IPR001766) - T[13-107] 39.024 |
| CDD |
Fork_head_dom (IPR001766) - T[13-90] 2.72979E-49 |
| ProSitePatterns |
TF_fork_head_CS_2 (IPR030456) - T[57-63] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FOXA2_HUMAN | 66.379 % | 179 | 2.68E-50 |
| FOXB1_HUMAN | 80.87 % | 221 | 3.93E-67 |
| FOXB2_HUMAN | 77.119 % | 213 | 8.64E-63 |