Aniseed - Transcript Card

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S654.g06122.01.t

Possible name(s)

RPL9

Gene model

Haaura.CG.MTP2014.S654.g06122

Location

S654 [41,477 / 42,325]

Sequences

Amino acid sequence

Length: 143

>Haaura.CG.MTP2014.S654.g06122.01.p
LFSATLGNLLPRSFLAPAMKNISSSQDVTVPEGVKIWVKGRCVTVRGERGVLKRNFNHLK
VELKKVSPDTVRVAKWFGNRKDLACVRTICSHITNMAVGVTKGYRYKMRAVYAHFPINCN
VAEGGQAIDIRNFLGEKFTRTVS

Nucleotide sequence

Length: 429

>Haaura.CG.MTP2014.S654.g06122.01.t
CTCTTTAGCGCCACCCTTGGAAATTTATTGCCTCGTTCATTCTTGGCCCCAGCAATGAAG
AATATTAGTTCTAGTCAAGATGTCACCGTCCCCGAGGGGGTAAAAATATGGGTGAAGGGT
AGATGTGTCACTGTTCGGGGCGAGAGAGGAGTTTTGAAACGAAATTTCAACCATCTTAAG
GTCGAGTTGAAGAAAGTATCCCCTGATACTGTGCGGGTGGCAAAATGGTTTGGCAATCGT
AAGGACCTTGCTTGCGTTAGAACAATTTGCAGCCATATAACAAACATGGCCGTGGGAGTG
ACTAAAGGATACAGATACAAAATGAGAGCAGTCTACGCTCACTTCCCGATCAATTGCAAT
GTTGCTGAAGGAGGTCAAGCAATCGATATCAGAAATTTCTTGGGAGAAAAATTCACTAGA
ACTGTGAGT

InterProScan

PANTHER	Ribosomal_L6 (IPR000702) - T[19-142] 3.2E-54
Gene3D	Ribosomal_L6_a/b-dom_sf (IPR036789) - T[19-103] 7.8E-33 - T[104-143] 1.9E-13
SUPERFAMILY	Ribosomal_L6_a/b-dom_sf (IPR036789) - T[20-103] 5.6E-21 - T[104-142] 1.01E-6
Pfam	Ribosomal_L6_a/b-dom (IPR020040) - T[30-103] 4.1E-15

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RL9_HUMAN	58.73 %	154	9.98E-49