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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S6...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S6489.g11103.03.t

Possible name(s)

RDH13

Gene model

Haaura.CG.MTP2014.S6489.g11103

Location

S6489 [2,548 / 3,316]

Sequences

Amino acid sequence

Length: 256

>Haaura.CG.MTP2014.S6489.g11103.03.p
GEEAKKKIVEESKSENVVLKKLDLSSFESIREFAADINDTESRLDVLINNAGVMMCPQSE
TKDGFEMQFGVNHLGHFLLTNLLLDLLKNSAPSRIVTVSSMAHYGWALATINWDDLNLRN
NYDSTLAYGQSKLCNVLFSRELSKRLQGTGVTSNSLEPGAVKTDLQRHVGTHEKPSFKDR
LMSFLTYFWKWMFTTPEKGAQTSIYLAVAPELVEVSGKFYSNCKQTGESYDAMNDDFAER
LWKISEELTKLKPKIE

Nucleotide sequence

Length: 768

>Haaura.CG.MTP2014.S6489.g11103.03.t
GGAGAAGAAGCAAAAAAGAAGATTGTCGAGGAATCAAAATCAGAAAACGTTGTTTTGAAG
AAACTTGATCTCTCGTCATTCGAATCTATTCGAGAATTTGCCGCTGACATCAACGATACC
GAATCTCGACTTGATGTTCTTATTAATAACGCCGGGGTGATGATGTGCCCCCAGTCCGAG
ACCAAGGATGGGTTCGAGATGCAGTTTGGGGTCAATCATCTGGGGCATTTCCTCTTAACG
AATTTGTTGTTGGATTTATTGAAGAATAGTGCACCAAGCAGGATTGTGACTGTATCATCT
ATGGCTCATTATGGATGGGCCTTAGCTACAATAAATTGGGACGATTTGAATTTAAGGAAC
AATTATGATTCAACTCTAGCTTATGGCCAAAGCAAGCTATGCAATGTGCTTTTCTCTAGA
GAGCTAAGCAAGAGGCTGCAAGGCACTGGTGTTACATCAAATAGTTTGGAACCTGGAGCT
GTTAAGACGGATTTACAGAGGCATGTTGGAACACATGAGAAGCCTTCGTTCAAGGACCGG
TTGATGTCTTTTCTCACTTATTTTTGGAAATGGATGTTCACCACCCCAGAAAAGGGAGCT
CAAACCTCTATTTACTTGGCAGTGGCTCCAGAGCTTGTAGAAGTCAGTGGAAAGTTTTAC
TCCAACTGCAAACAGACGGGAGAGTCGTACGATGCGATGAACGATGATTTTGCAGAGAGA
TTGTGGAAAATCAGTGAAGAACTAACCAAGCTGAAACCGAAAATTGAG

InterProScan

Pfam
SDR_fam (IPR002347) - T[3-102] 1.4E-14
SUPERFAMILY
NAD(P)-bd_dom_sf (IPR036291) - T[3-226] 5.95E-42
PRINTS
SDR_fam (IPR002347) - T[42-53] 2.7E-11 - T[42-53] 9.2E-6 - T[87-103] 2.7E-11 - T[93-101] 9.2E-6 - T[128-147] 2.7E-11 - T[128-147] 9.2E-6 - T[149-166] 2.7E-11

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RDH13_HUMAN 51.984 % 226 4.52E-73
RDH14_HUMAN 51.271 % 217 1.65E-69
RDH12_HUMAN 48.016 % 213 3.67E-68