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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S6...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S6489.g11103.01.t

Possible name(s)

RDH13

Gene model

Haaura.CG.MTP2014.S6489.g11103

Location

S6489 [2,491 / 3,211]

Sequences

Amino acid sequence

Length: 240

>Haaura.CG.MTP2014.S6489.g11103.01.p
DINDTESRLDVLINNAGVMMCPQSETKDGFEMQFGVNHLGHFLLTNLLLDLLKNSAPSRI
VTVSSMAHYGWALATINWDDLNLRNNYDSTLAYGQSKLCNVLFSRELSKRLQGTGVTSNS
LEPGAVKTDLQRHVGTHEKPSFKDRLMSFLTYFWKWMFTTPEKGAQTSIYLAVAPELVEV
SGKFYSNCKQTGESYDAMNDDFAERLWKISEELTKLKPKIEGEEEEQSEKQQNTPEQSKE

Nucleotide sequence

Length: 720

>Haaura.CG.MTP2014.S6489.g11103.01.t
GACATCAACGATACCGAATCTCGACTTGATGTTCTTATTAATAACGCCGGGGTGATGATG
TGCCCCCAGTCCGAGACCAAGGATGGGTTCGAGATGCAGTTTGGGGTCAATCATCTGGGG
CATTTCCTCTTAACGAATTTGTTGTTGGATTTATTGAAGAATAGTGCACCAAGCAGGATT
GTGACTGTATCATCTATGGCTCATTATGGATGGGCCTTAGCTACAATAAATTGGGACGAT
TTGAATTTAAGGAACAATTATGATTCAACTCTAGCTTATGGCCAAAGCAAGCTATGCAAT
GTGCTTTTCTCTAGAGAGCTAAGCAAGAGGCTGCAAGGCACTGGTGTTACATCAAATAGT
TTGGAACCTGGAGCTGTTAAGACGGATTTACAGAGGCATGTTGGAACACATGAGAAGCCT
TCGTTCAAGGACCGGTTGATGTCTTTTCTCACTTATTTTTGGAAATGGATGTTCACCACC
CCAGAAAAGGGAGCTCAAACCTCTATTTACTTGGCAGTGGCTCCAGAGCTTGTAGAAGTC
AGTGGAAAGTTTTACTCCAACTGCAAACAGACGGGAGAGTCGTACGATGCGATGAACGAT
GATTTTGCAGAGAGATTGTGGAAAATCAGTGAAGAACTAACCAAGCTGAAACCGAAAATT
GAGGGAGAAGAAGAGGAGCAGAGTGAGAAGCAGCAGAATACTCCTGAGCAGAGCAAGGAG

InterProScan

SUPERFAMILY
NAD(P)-bd_dom_sf (IPR036291) - T[4-191] 2.95E-35
PRINTS
SDR_fam (IPR002347) - T[7-18] 2.2E-11 - T[7-18] 7.9E-6 - T[52-68] 2.2E-11 - T[58-66] 7.9E-6 - T[93-112] 2.2E-11 - T[93-112] 7.9E-6 - T[114-131] 2.2E-11

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RDH13_HUMAN 50 % 197 3.85E-62
RDH14_HUMAN 53.774 % 199 6.89E-63
RDH12_HUMAN 49.528 % 186 5.18E-58