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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C1.363.v1....' > 
  2. Transcript 'KH2012:KH.C4.229.v1....' > 
  3. Transcript 'Cisavi.CG.ENS81.R183...' > 
  4. Transcript 'KH2012:KH.L116.59.v1...' > 
  5. Transcript 'Haaura.CG.MTP2014.S6...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S624.g06006.03.t

Possible name(s)

RNF13; RNF167; ZNRF4

Gene model

Haaura.CG.MTP2014.S624.g06006

Location

S624 [27,705 / 35,889]

Sequences

Amino acid sequence

Length: 340

>Haaura.CG.MTP2014.S624.g06006.03.p
MLSLIRFPSRASIVLSPDIPFTLVHEVFLVLTVLGTSLCIVAIMRIIKCCRDRRRQRRGR
LSLERLKKLPVKNFEKGDEYDICAICLDDYEEGDKLRILPCAHAYHCKCVDPWLTSSKRI
CPLCKRRVLSDDEDSSSSEEDDSDDERTPLVQASTASSPNSSLFATGFSRNNPIIRAIAR
QNRRASTSSTETVSTSTSSDEEQQMSSIRTSTSTSRSTRREDLPQTSDGYQSQRLSATPI
LVDTVRVYPSPVDDSEEDVQVLVMGGNRVSESSITVISECDSPSSSISRTPEEHSYNSMD
FHSLDDNSLAAQDNTLSEPYSDGNESDVQDDIIVIAGGK*

Nucleotide sequence

Length: 1,750

>Haaura.CG.MTP2014.S624.g06006.03.t
GTAGAAAAACCAAACGCCATGGATTACCGTAACATCGGAATCATGATGTACGGATTGGCG
ATTTCCGTCAACATAGTTTTCGTCACTTCTTTTTCGTTTGCTGATGGAATTGTTATTGCT
TATGATCATTACAACGGAACCGAAGAATTTGAAGATGTAGAATCGACATTTGGTTCTTCC
ATTCCTGATAACGGAATGTTGGGAGTTTTAGTTCGAGCAGAGCCTCATGATGGTTGTCAG
CCATTGAAACCTCCACCTTTCCCGAGCGGATTTAATCAACGTAACGTAACACTGGCATCA
TTTGCACTGATTGTGAGAGGGAACTGTGAATTTGGTGCAAAGATCCTCAATGCACAAAAC
TCTGGTTATTTAGCAGCTGTAGTCTACAATGACGAATCTGATCTCCTAATAAAAATGAGT
TCAACCATCAGTGGAATAACCATCCCATCCGTGTTTGTTGGAATAACAGCGGGTGCCATC
CTGAACTCATCGTATCTTTATGACAGGCAGGGTCAACCTTACATTCAATTGTATGAGGGT
TCGATCAACCCGCTCGAATATTATCTCATACCATTCGTGATTGTATTAGCAGTTTGCTTT
GTATCTTTATTATGTTTCATGGTAAGTTTTTGCAAGGTAGAATTGCAAGTTTACATTCAC
ATGGCAAGTTCAACTTTAGCATGTGCATCCCTTCTTACCTCCACAATTAACCACTCAGTG
AATAGTATATATGCTTAGCCTCATTCGCTTTCCTTCTAGAGCGAGCATAGTTCTTTCGCC
CGACATTCCATTCACCTTGGTGCATGAAGTTTTCCTTGTCCTTACTGTTCTTGGCACTTC
TCTGTGTATTGTTGCTATTATGAGGATTATTAAATGCTGTCGAGACAGAAGGCGGCAGCG
TCGAGGACGACTCTCGCTAGAGAGACTCAAAAAACTTCCTGTTAAAAACTTTGAGAAAGG
TGATGAATACGACATTTGTGCAATATGTTTGGATGATTATGAAGAAGGAGACAAATTAAG
AATATTGCCTTGTGCGCACGCATATCACTGCAAATGTGTAGACCCATGGCTCACAAGCAG
TAAAAGAATTTGCCCCCTTTGCAAGCGCCGAGTTTTAAGTGATGATGAAGACAGTTCTTC
TTCTGAGGAGGATGACAGCGATGATGAAAGAACTCCTCTAGTTCAGGCATCCACAGCTTC
CTCTCCAAATTCCTCCCTTTTTGCAACTGGGTTCAGCAGAAATAATCCTATAATCAGAGC
AATTGCTAGACAGAATAGAAGAGCAAGTACTTCCTCAACAGAAACAGTGAGCACTTCGAC
ATCATCAGATGAAGAACAGCAGATGTCTTCAATCAGAACATCAACAAGTACTTCTCGCAG
CACCAGACGTGAAGATTTGCCACAGACATCAGATGGTTATCAATCTCAGAGACTGTCTGC
CACACCGATACTGGTCGATACCGTCCGAGTATATCCATCTCCGGTTGATGATAGCGAGGA
AGATGTGCAGGTTTTGGTGATGGGAGGGAACCGTGTTTCGGAGTCATCAATTACTGTGAT
ATCAGAATGTGATTCACCATCGTCAAGTATCAGTAGAACGCCAGAGGAACATTCATACAA
TTCAATGGATTTCCATAGCCTTGATGACAATTCATTGGCGGCGCAAGATAACACACTCTC
GGAACCATATTCTGATGGTAATGAAAGTGATGTTCAAGACGATATCATCGTTATTGCTGG
CGGTAAGTGA

InterProScan

Gene3D
Znf_RING/FYVE/PHD (IPR013083) - T[60-135] 1.1E-19
Pfam
Znf_RING (IPR001841) - T[82-125] 5.1E-13
SMART
Znf_RING-CH (IPR011016) - T[82-125] 0.0072
ProSiteProfiles
Znf_RING (IPR001841) - T[83-125] 12.711
SMART
Znf_RING (IPR001841) - T[83-124] 9.5E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RNF13_HUMAN 47.799 % 147 4.9E-41
RN167_HUMAN 39.394 % 144 4.01E-40
ZNRF4_HUMAN 39.394 % 94.4 1.64E-21