- Transcript 'Moocul.CG.ELv1_2.S68...' >
- Transcript 'Haaura.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S624.g06006.02.t
Possible name(s)
RNF13; RNF167; ZNRF4
Gene model
Location
S624 [27,705 / 35,889]
Amino acid sequence
Length: 502
>Haaura.CG.MTP2014.S624.g06006.02.p
VEKPNAMDYRNIGIMMYGLAISVNIVFVTSFSFADGIVIAYDHYNGTEEFEDVESTFGSS
IPDNGMLGVLVRAEPHDGCQPLKPPPFPSGFNQRNVTLASFALIVRGNCEFGAKILNAQN
SGYLAAVVYNDESDLLIKMSSTISGITIPSVFVGITAGAILNSSYLYDRQGQPYIQLYEG
SINPLEYYLIPFVIVLAVCFVSLLCFMIIKCCRDRRRQRRGRLSLERLKKLPVKNFEKGD
EYDICAICLDDYEEGDKLRILPCAHAYHCKCVDPWLTSSKRICPLCKRRVLSDDEDSSSS
EEDDSDDERTPLVQASTASSPNSSLFATGFSRNNPIIRAIARQNRRASTSSTETVSTSTS
SDEEQQMSSIRTSTSTSRSTRREDLPQTSDGYQSQRLSATPILVDTVRVYPSPVDDSEED
VQVLVMGGNRVSESSITVISECDSPSSSISRTPEEHSYNSMDFHSLDDNSLAAQDNTLSE
PYSDGNESDVQDDIIVIAGGK*
Nucleotide sequence
Length: 1,506
>Haaura.CG.MTP2014.S624.g06006.02.t
GTAGAAAAACCAAACGCCATGGATTACCGTAACATCGGAATCATGATGTACGGATTGGCG
ATTTCCGTCAACATAGTTTTCGTCACTTCTTTTTCGTTTGCTGATGGAATTGTTATTGCT
TATGATCATTACAACGGAACCGAAGAATTTGAAGATGTAGAATCGACATTTGGTTCTTCC
ATTCCTGATAACGGAATGTTGGGAGTTTTAGTTCGAGCAGAGCCTCATGATGGTTGTCAG
CCATTGAAACCTCCACCTTTCCCGAGCGGATTTAATCAACGTAACGTAACACTGGCATCA
TTTGCACTGATTGTGAGAGGGAACTGTGAATTTGGTGCAAAGATCCTCAATGCACAAAAC
TCTGGTTATTTAGCAGCTGTAGTCTACAATGACGAATCTGATCTCCTAATAAAAATGAGT
TCAACCATCAGTGGAATAACCATCCCATCCGTGTTTGTTGGAATAACAGCGGGTGCCATC
CTGAACTCATCGTATCTTTATGACAGGCAGGGTCAACCTTACATTCAATTGTATGAGGGT
TCGATCAACCCGCTCGAATATTATCTCATACCATTCGTGATTGTATTAGCAGTTTGCTTT
GTATCTTTATTATGTTTCATGATTATTAAATGCTGTCGAGACAGAAGGCGGCAGCGTCGA
GGACGACTCTCGCTAGAGAGACTCAAAAAACTTCCTGTTAAAAACTTTGAGAAAGGTGAT
GAATACGACATTTGTGCAATATGTTTGGATGATTATGAAGAAGGAGACAAATTAAGAATA
TTGCCTTGTGCGCACGCATATCACTGCAAATGTGTAGACCCATGGCTCACAAGCAGTAAA
AGAATTTGCCCCCTTTGCAAGCGCCGAGTTTTAAGTGATGATGAAGACAGTTCTTCTTCT
GAGGAGGATGACAGCGATGATGAAAGAACTCCTCTAGTTCAGGCATCCACAGCTTCCTCT
CCAAATTCCTCCCTTTTTGCAACTGGGTTCAGCAGAAATAATCCTATAATCAGAGCAATT
GCTAGACAGAATAGAAGAGCAAGTACTTCCTCAACAGAAACAGTGAGCACTTCGACATCA
TCAGATGAAGAACAGCAGATGTCTTCAATCAGAACATCAACAAGTACTTCTCGCAGCACC
AGACGTGAAGATTTGCCACAGACATCAGATGGTTATCAATCTCAGAGACTGTCTGCCACA
CCGATACTGGTCGATACCGTCCGAGTATATCCATCTCCGGTTGATGATAGCGAGGAAGAT
GTGCAGGTTTTGGTGATGGGAGGGAACCGTGTTTCGGAGTCATCAATTACTGTGATATCA
GAATGTGATTCACCATCGTCAAGTATCAGTAGAACGCCAGAGGAACATTCATACAATTCA
ATGGATTTCCATAGCCTTGATGACAATTCATTGGCGGCGCAAGATAACACACTCTCGGAA
CCATATTCTGATGGTAATGAAAGTGATGTTCAAGACGATATCATCGTTATTGCTGGCGGT
AAGTGA
| Pfam |
PA_domain (IPR003137) - T[70-159] 6.0E-7 |
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[222-297] 2.0E-19 |
| Pfam |
Znf_RING (IPR001841) - T[244-287] 8.7E-13 |
| SMART |
Znf_RING-CH (IPR011016) - T[244-287] 0.0072 |
| SMART |
Znf_RING (IPR001841) - T[245-286] 9.5E-8 |
| ProSiteProfiles |
Znf_RING (IPR001841) - T[245-287] 12.711 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RNF13_HUMAN | 41.509 % | 262 | 3.98E-83 |
| RN167_HUMAN | 37.793 % | 215 | 1.82E-65 |
| ZNRF4_HUMAN | 33.091 % | 143 | 9.94E-38 |