- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.C1.523.v2....' >
- Transcript 'KH2012:KH.C2.216.v2....' >
- Transcript 'Moocci.CG.ELv1_2.S38...' >
- Transcript 'Haaura.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S624.g06006.01.t
Possible name(s)
RNF13; RNF167; ZNRF4
Gene model
Location
S624 [27,705 / 35,889]
Amino acid sequence
Length: 500
>Haaura.CG.MTP2014.S624.g06006.01.p
VEKPNAMDYRNIGIMMYGLAISVNIVFVTSFSFADGIVIAYDHYNGTEEFEDVESTFGSS
IPDNGMLGVLVRAEPHDGCQPLKPPPFPSGFNQRNVTLASFALIVRGNCEFGAKILNAQN
SGYLAAVVYNDESDLLIKMSSTISGITIPSVFVGITAGAILNSSYLYDRQASIVLSPDIP
FTLVHEVFLVLTVLGTSLCIVAIMRIIKCCRDRRRQRRGRLSLERLKKLPVKNFEKGDEY
DICAICLDDYEEGDKLRILPCAHAYHCKCVDPWLTSSKRICPLCKRRVLSDDEDSSSSEE
DDSDDERTPLVQASTASSPNSSLFATGFSRNNPIIRAIARQNRRASTSSTETVSTSTSSD
EEQQMSSIRTSTSTSRSTRREDLPQTSDGYQSQRLSATPILVDTVRVYPSPVDDSEEDVQ
VLVMGGNRVSESSITVISECDSPSSSISRTPEEHSYNSMDFHSLDDNSLAAQDNTLSEPY
SDGNESDVQDDIIVIAGGK*
Nucleotide sequence
Length: 1,500
>Haaura.CG.MTP2014.S624.g06006.01.t
GTAGAAAAACCAAACGCCATGGATTACCGTAACATCGGAATCATGATGTACGGATTGGCG
ATTTCCGTCAACATAGTTTTCGTCACTTCTTTTTCGTTTGCTGATGGAATTGTTATTGCT
TATGATCATTACAACGGAACCGAAGAATTTGAAGATGTAGAATCGACATTTGGTTCTTCC
ATTCCTGATAACGGAATGTTGGGAGTTTTAGTTCGAGCAGAGCCTCATGATGGTTGTCAG
CCATTGAAACCTCCACCTTTCCCGAGCGGATTTAATCAACGTAACGTAACACTGGCATCA
TTTGCACTGATTGTGAGAGGGAACTGTGAATTTGGTGCAAAGATCCTCAATGCACAAAAC
TCTGGTTATTTAGCAGCTGTAGTCTACAATGACGAATCTGATCTCCTAATAAAAATGAGT
TCAACCATCAGTGGAATAACCATCCCATCCGTGTTTGTTGGAATAACAGCGGGTGCCATC
CTGAACTCATCGTATCTTTATGACAGGCAAGCGAGCATAGTTCTTTCGCCCGACATTCCA
TTCACCTTGGTGCATGAAGTTTTCCTTGTCCTTACTGTTCTTGGCACTTCTCTGTGTATT
GTTGCTATTATGAGGATTATTAAATGCTGTCGAGACAGAAGGCGGCAGCGTCGAGGACGA
CTCTCGCTAGAGAGACTCAAAAAACTTCCTGTTAAAAACTTTGAGAAAGGTGATGAATAC
GACATTTGTGCAATATGTTTGGATGATTATGAAGAAGGAGACAAATTAAGAATATTGCCT
TGTGCGCACGCATATCACTGCAAATGTGTAGACCCATGGCTCACAAGCAGTAAAAGAATT
TGCCCCCTTTGCAAGCGCCGAGTTTTAAGTGATGATGAAGACAGTTCTTCTTCTGAGGAG
GATGACAGCGATGATGAAAGAACTCCTCTAGTTCAGGCATCCACAGCTTCCTCTCCAAAT
TCCTCCCTTTTTGCAACTGGGTTCAGCAGAAATAATCCTATAATCAGAGCAATTGCTAGA
CAGAATAGAAGAGCAAGTACTTCCTCAACAGAAACAGTGAGCACTTCGACATCATCAGAT
GAAGAACAGCAGATGTCTTCAATCAGAACATCAACAAGTACTTCTCGCAGCACCAGACGT
GAAGATTTGCCACAGACATCAGATGGTTATCAATCTCAGAGACTGTCTGCCACACCGATA
CTGGTCGATACCGTCCGAGTATATCCATCTCCGGTTGATGATAGCGAGGAAGATGTGCAG
GTTTTGGTGATGGGAGGGAACCGTGTTTCGGAGTCATCAATTACTGTGATATCAGAATGT
GATTCACCATCGTCAAGTATCAGTAGAACGCCAGAGGAACATTCATACAATTCAATGGAT
TTCCATAGCCTTGATGACAATTCATTGGCGGCGCAAGATAACACACTCTCGGAACCATAT
TCTGATGGTAATGAAAGTGATGTTCAAGACGATATCATCGTTATTGCTGGCGGTAAGTGA
| Pfam |
PA_domain (IPR003137) - T[70-159] 6.0E-7 |
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[220-295] 2.0E-19 |
| Pfam |
Znf_RING (IPR001841) - T[242-285] 8.7E-13 |
| SMART |
Znf_RING-CH (IPR011016) - T[242-285] 0.0072 |
| SMART |
Znf_RING (IPR001841) - T[243-284] 9.5E-8 |
| ProSiteProfiles |
Znf_RING (IPR001841) - T[243-285] 12.711 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RNF13_HUMAN | 39.024 % | 245 | 8.97E-77 |
| RN167_HUMAN | 37.037 % | 210 | 1.38E-63 |
| ZNRF4_HUMAN | 35.636 % | 158 | 3.25E-43 |