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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S6...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S6246.g11065.01.t

Possible name(s)

POC1A; WDR61; WRAP73

Location

S6246 [2,402 / 3,563]

Sequences

Amino acid sequence

Length: 387

>Haaura.CG.MTP2014.S6246.g11065.01.p
MNFSELFKQTYQLSTFSPDGKYLANCVSYKLIIRDANTLQIVRLYTCLDIIQQISWSSDS
AFLLCALYKRGIVQAWSIEQPDWTCKVDEGSAGLIRAQWSPDGRHILTTASFNLRITVWS
LVNKSVSYIRYVKNSKDCLSFSKDGKYLALGESRKCKDYVSIFAVESWQMMKIFETDTED
MAGLEWSPDGRVLCVWDNMLWYKVLIYTMDGRCLSTYRAYEWALGIKKMAWSPTSQFLAV
GSYDQKVRLLNHITWKSISEFTHNSTVQGNNVVLYKENEKRPKILGGEIEGSNLIPAVFS
TQSKYEFCEPPFALPFVQPNPDKPNPKIGAGWMEFSPDNKYLATIDDSMRTCVNIWSMQK
LSLFVVLQQTSPIKCAKWDPKSSRLAL

Nucleotide sequence

Length: 1,161

>Haaura.CG.MTP2014.S6246.g11065.01.t
ATGAATTTCTCAGAGTTATTCAAACAAACTTACCAACTTAGTACTTTTTCGCCCGATGGA
AAATACCTAGCGAACTGCGTTTCGTACAAATTAATCATCCGTGATGCAAATACATTGCAA
ATTGTAAGACTTTACACATGCCTCGATATAATACAGCAAATATCATGGTCATCTGACTCG
GCATTCCTTCTGTGCGCTCTCTACAAGCGAGGGATCGTGCAAGCATGGTCCATTGAGCAG
CCGGACTGGACATGTAAAGTGGACGAAGGGTCTGCGGGGCTGATCCGTGCCCAGTGGAGT
CCGGACGGACGTCACATCTTGACCACTGCAAGTTTTAACCTCAGGATTACAGTTTGGTCT
CTGGTAAACAAGTCTGTTTCGTATATACGCTACGTGAAGAACTCGAAAGACTGCCTCAGC
TTTTCGAAGGACGGGAAGTACCTGGCTCTGGGGGAAAGCCGGAAATGCAAAGATTACGTG
AGTATCTTCGCGGTGGAGTCGTGGCAGATGATGAAAATCTTCGAAACTGACACAGAAGAC
ATGGCGGGTTTAGAGTGGTCGCCTGACGGCAGGGTGCTTTGTGTCTGGGACAATATGTTG
TGGTACAAAGTGCTGATATACACCATGGACGGGCGATGCCTTTCTACGTACAGAGCTTAC
GAATGGGCTTTGGGGATCAAGAAAATGGCCTGGTCTCCCACGAGTCAATTCTTAGCTGTG
GGAAGCTACGACCAGAAGGTCAGACTATTGAATCATATCACATGGAAATCCATTTCCGAA
TTCACCCATAATTCCACAGTGCAAGGCAACAATGTTGTCCTTTACAAAGAAAATGAAAAA
AGACCAAAAATATTAGGTGGCGAAATAGAGGGGTCCAATTTAATACCTGCTGTATTCAGT
ACCCAGAGCAAATATGAGTTTTGCGAACCCCCGTTCGCGCTCCCTTTCGTGCAGCCCAAT
CCCGACAAACCCAACCCCAAGATCGGGGCGGGATGGATGGAGTTCAGTCCCGATAACAAA
TATTTGGCCACGATTGATGATAGCATGCGTACTTGCGTTAACATATGGAGTATGCAAAAG
CTTTCATTGTTCGTTGTCCTCCAGCAAACCTCTCCAATCAAATGTGCTAAGTGGGATCCG
AAGTCAAGCAGGCTTGCCCTT

InterProScan

SUPERFAMILY
WD40_repeat_dom_sf (IPR036322) - T[9-267] 8.42E-35 - T[328-386] 8.42E-35
Gene3D
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[13-133] 1.9E-9
SMART
WD40_repeat (IPR001680) - T[38-77] 440.0 - T[78-120] 14.0 - T[210-251] 0.015
Pfam
WD40_repeat (IPR001680) - T[211-249] 0.0036

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
WRP73_HUMAN 56.997 % 483 2.93E-170