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TRANSCRIPT CARD

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  1. Clone 'cinc030c16' > 
  2. Transcript 'Phfumi.CG.MTP2014.S1...' > 
  3. Transcript 'Phmamm.CG.MTP2014.S3...' > 
  4. Transcript 'Haaura.CG.MTP2014.S6...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S621.g05990.01.t

Possible name(s)

PAK1IP1; TAF5L; WDR5B

Gene model

Haaura.CG.MTP2014.S621.g05990

Location

S621 [2,649 / 3,925]

Sequences

Amino acid sequence

Length: 326

>Haaura.CG.MTP2014.S621.g05990.01.p
MLRVIAGCYEQMLLGYTIHKNDDEDSTYPFRGELEFTDHSHSGCVKAVTTGESYLASGGT
DETVFLIDLNDKKEVGSLQGHEGSITHLSFPDKNYLMSSSDDGAINFWKVSAKWNKVKSL
HGHKGPVSSFDVHPSGKLALSVSSKDGTLRTWNMLSGRAVYVKNLKKFCPETVKFSPGDG
ELYLIASSTNVQVCKLENAVCIADISLEKSILCTEFISKDIVAVAGEEGVIYIHSTQDGS
QLCSIEGHTSRVKALHRIITPASFSNPEESVWLGSISSDGYFKIWSVNMTDMKDNKKTAL
QSPKCILAIDTKARLTCFTSWFSEA*

Nucleotide sequence

Length: 978

>Haaura.CG.MTP2014.S621.g05990.01.t
ATGCTGAGGGTGATAGCTGGGTGTTATGAGCAAATGTTGCTCGGATATACCATTCACAAA
AATGATGATGAAGATTCAACATATCCTTTCAGAGGGGAGTTGGAGTTTACTGACCATTCC
CATAGTGGCTGTGTGAAGGCTGTTACAACCGGAGAATCTTATCTGGCGTCAGGAGGAACA
GATGAAACAGTTTTCCTCATCGATTTGAATGATAAAAAGGAGGTTGGTTCACTACAAGGA
CATGAAGGAAGCATAACCCACTTGAGTTTCCCTGACAAAAATTACTTGATGAGCTCTAGT
GATGATGGTGCAATAAACTTTTGGAAGGTTTCGGCGAAGTGGAATAAAGTGAAATCCTTA
CATGGTCACAAAGGCCCGGTGTCATCGTTTGACGTTCATCCGAGTGGAAAACTAGCATTG
TCCGTGTCTTCCAAAGATGGCACGCTAAGAACCTGGAACATGCTGAGTGGCCGTGCCGTG
TATGTCAAAAATCTTAAAAAGTTTTGTCCGGAAACTGTCAAGTTTAGTCCGGGCGATGGG
GAACTTTACTTAATCGCATCGTCAACAAATGTACAAGTTTGCAAACTAGAAAACGCAGTG
TGTATTGCAGACATTTCCTTGGAAAAATCTATTTTGTGCACTGAATTTATCTCTAAAGAT
ATTGTGGCAGTAGCAGGAGAAGAAGGTGTCATATACATTCACAGTACACAAGACGGAAGC
CAGCTGTGTTCGATTGAAGGTCACACATCGAGAGTCAAAGCCCTACACAGAATCATTACA
CCAGCTTCATTTTCAAACCCTGAAGAATCCGTTTGGTTGGGATCTATATCTAGCGATGGA
TATTTCAAAATATGGTCTGTAAATATGACTGACATGAAAGATAACAAAAAGACAGCTCTT
CAATCGCCTAAATGTATTTTAGCTATAGATACGAAGGCACGATTAACATGCTTTACTTCA
TGGTTTAGTGAAGCATAA

InterProScan

Gene3D
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[17-113] 2.0E-17 - T[114-321] 4.6E-24
SUPERFAMILY
WD40_repeat_dom_sf (IPR036322) - T[20-293] 6.66E-44
SMART
WD40_repeat (IPR001680) - T[31-68] 0.83 - T[71-109] 1.7E-5 - T[113-153] 2.3E-6 - T[198-235] 38.0 - T[238-286] 35.0
ProSiteProfiles
WD40_repeat_dom (IPR017986) - T[38-162] 22.28
Pfam
WD40_repeat (IPR001680) - T[73-109] 1.6E-5 - T[114-153] 1.2E-5
ProSiteProfiles
WD40_repeat (IPR001680) - T[78-111] 11.411 - T[120-162] 11.544

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PK1IP_HUMAN 36.81 % 200 2.93E-61