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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S4...' > 
  2. Transcript 'Moocul.CG.ELv1_2.S13...' > 
  3. Transcript 'Cisavi.CG.ENS81.R16....' > 
  4. Transcript 'Mooccu.CG.ELv1_2.S53...' > 
  5. Transcript 'Haaura.CG.MTP2014.S6...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S6151.g11053.01.t

Possible name(s)

SOX14; SOX2; SOX21

Gene model

Haaura.CG.MTP2014.S6151.g11053

Location

S6151 [141 / 1,420]

Sequences

Amino acid sequence

Length: 234

>Haaura.CG.MTP2014.S6151.g11053.01.p
QQRLGAAWKLLNETEKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKSLMKNKERFSFPLF
SSNVHHTTDAATSAAIAMAAQQAAVAQMTMDPIAAEKARAAAAAFFPPTSSSYLNALEMT
SSASSLARLAAAVRDSPLYSAACSGLYPSPTYASAATSSAFLPTQCAARASGPPSPIMSP
FMLPGSSSPTWSTQAALQRPLAYIFVPGAQHSFSPSHLKSGLEYYTPMPLPAM*

Nucleotide sequence

Length: 702

>Haaura.CG.MTP2014.S6151.g11053.01.t
CAACAGCGTCTCGGAGCTGCTTGGAAATTGCTTAACGAAACCGAGAAACGACCATTCATC
GACGAGGCAAAACGCCTTCGTGCACTCCACATGAAGGAACATCCGGATTACAAATACAGA
CCAAGAAGAAAACCAAAATCCCTGATGAAGAACAAAGAAAGATTCTCTTTTCCTTTGTTT
TCATCGAACGTACATCACACGACAGACGCAGCAACATCAGCAGCTATAGCAATGGCCGCA
CAACAAGCTGCTGTGGCCCAAATGACTATGGATCCGATAGCTGCCGAAAAAGCCCGAGCT
GCAGCGGCTGCATTTTTCCCACCTACGTCATCGTCCTACTTGAACGCGCTAGAAATGACG
TCAAGCGCTTCGTCATTGGCTAGACTCGCAGCAGCCGTTCGCGATTCGCCTCTCTACAGC
GCGGCCTGTTCGGGACTATATCCGTCTCCAACTTATGCTAGCGCCGCCACAAGCAGTGCA
TTTCTACCGACACAATGTGCAGCTCGTGCATCTGGACCCCCATCTCCAATAATGAGCCCA
TTTATGCTTCCGGGGTCATCTTCCCCGACCTGGTCAACCCAAGCCGCGCTTCAGCGTCCT
CTAGCGTACATATTCGTACCTGGGGCCCAGCATTCTTTTTCCCCAAGCCACCTTAAATCC
GGACTGGAATATTACACACCCATGCCTCTCCCGGCAATGTAA

InterProScan

ProSiteProfiles
HMG_box_dom (IPR009071) - T[1-38] 12.233
Gene3D
HMG_box_dom_sf (IPR036910) - T[1-45] 7.3E-13
SUPERFAMILY
HMG_box_dom_sf (IPR036910) - T[2-49] 2.62E-12
Pfam
HMG_box_dom (IPR009071) - T[2-38] 6.7E-9

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SOX2_HUMAN 80.702 % 104 1.23E-26
SOX21_HUMAN 79.31 % 104 4.62E-27
SOX14_HUMAN 41.429 % 120 2.27E-33