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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C11.210.v2...' > 
  2. Region 'REG00001180' > 
  3. Transcript 'Haaura.CG.MTP2014.S6...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S611.g05952.01.t

Possible name(s)

ACTA2; ACTC1; ACTG2

Gene model

Haaura.CG.MTP2014.S611.g05952

Location

S611 [44,433 / 45,300]

Sequences

Amino acid sequence

Length: 194

>Haaura.CG.MTP2014.S611.g05952.01.p
MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHNVPIYEGYALPHAIARL
DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLYGQVITIGNERFRCPETLFQPS
FIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTM
KIKIIAPPERKYSV

Nucleotide sequence

Length: 582

>Haaura.CG.MTP2014.S611.g05952.01.t
ATGACACAAATTATGTTTGAAACTTTCAATGTGCCTGCTATGTATGTTGCCATCCAGGCT
GTACTTTCTCTCTATGCCTCTGGAAGAACAACTGGTATTGTTCTTGATTCTGGTGATGGT
GTTTCCCATAACGTACCAATCTATGAAGGATATGCTCTCCCTCATGCTATTGCACGATTG
GATTTAGCTGGCCGTGATCTTACTGATTACCTAATGAAGATCCTCACAGAAAGAGGATAC
TCATTTGTTACGACTGCTGAACGAGAAATAGTTCGTGATATCAAAGAGAAACTGTACGGT
CAAGTCATCACTATCGGAAATGAGAGATTCCGTTGTCCTGAAACCCTCTTCCAACCATCC
TTCATTGGTATGGAATCTGCCGGTATTCATGAAACAACATATAACTCTATCATGAAATGC
GATATTGACATTCGAAAAGATCTTTATGCAAACAACGTACTTTCCGGAGGAACCACCATG
TATCCTGGTATTGCTGATCGTATGCAAAAAGAAATCACTGCTCTTGCCCCAAGTACCATG
AAGATCAAAATCATTGCTCCTCCCGAACGTAAATACTCTGTA

InterProScan

SMART
Actin (IPR004000) - T[1-194] 2.8E-31
PANTHER
Actin (IPR004000) - T[1-98] 2.5E-129 - T[100-194] 2.5E-129
Pfam
Actin (IPR004000) - T[1-97] 5.3E-29 - T[100-194] 1.7E-30

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ACTA_HUMAN 86.425 % 380 3.1E-134
ACTC_HUMAN 86.425 % 380 2.87E-134
ACTH_HUMAN 86.425 % 380 3.93E-134