- Transcript 'Haaura.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S611.g05951.01.t
Possible name(s)
ACTA1; ACTA2; ACTC1
Gene model
Location
S611 [44,424 / 45,663]
Amino acid sequence
Length: 345
>Haaura.CG.MTP2014.S611.g05951.01.p
MSDGEEDTTAIVCDNGSGLVKSGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE
AQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANRE
KMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHNVPIYEGYALPHAIAR
LDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFEQEMATAASSTSLE
KSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANN
VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIG
Nucleotide sequence
Length: 1,035
>Haaura.CG.MTP2014.S611.g05951.01.t
ATGTCTGATGGTGAAGAAGATACAACTGCAATCGTCTGCGACAATGGATCAGGATTGGTT
AAATCTGGTTTTGCCGGTGATGATGCTCCAAGAGCAGTATTCCCTTCTATTGTAGGACGA
CCAAGACATCAAGGTGTTATGGTAGGAATGGGACAGAAAGACAGTTATGTTGGAGATGAA
GCACAAAGTAAAAGAGGAATTCTCACTCTCAAATATCCAATTGAACATGGAATCATCACC
AATTGGGATGATATGGAGAAAATATGGCATCATACCTTCTACAATGAGCTCCGTGTTGCT
CCTGAAGAACATCCAACTCTTCTCACAGAAGCTCCGTTGAATCCTAAAGCTAACAGAGAA
AAGATGACACAAATTATGTTTGAAACTTTCAATGTGCCTGCTATGTATGTTGCCATCCAG
GCTGTACTTTCTCTCTATGCCTCTGGAAGAACAACTGGTATTGTTCTTGATTCTGGTGAT
GGTGTTTCCCATAACGTACCAATCTATGAAGGATATGCTCTCCCTCATGCTATTGCACGA
TTGGATTTAGCTGGCCGTGATCTTACTGATTACCTAATGAAGATCCTCACAGAAAGAGGA
TACTCATTTGTTACGACTGCTGAACGAGAAATAGTTCGTGATATCAAAGAGAAACTGTGC
TATGTTGCTCTTGATTTCGAACAAGAAATGGCAACGGCAGCTTCCTCTACATCTCTGGAA
AAAAGTTATGAGCTTCCCGACGGTCAAGTCATCACTATCGGAAATGAGAGATTCCGTTGT
CCTGAAACCCTCTTCCAACCATCCTTCATTGGTATGGAATCTGCCGGTATTCATGAAACA
ACATATAACTCTATCATGAAATGCGATATTGACATTCGAAAAGATCTTTATGCAAACAAC
GTACTTTCCGGAGGAACCACCATGTATCCTGGTATTGCTGATCGTATGCAAAAAGAAATC
ACTGCTCTTGCCCCAAGTACCATGAAGATCAAAATCATTGCTCCTCCCGAACGTAAATAC
TCTGTATGGATCGGA
| PANTHER |
Actin (IPR004000) - T[5-345] 2.5E-243 |
| Pfam |
Actin (IPR004000) - T[6-345] 2.0E-126 |
| SMART |
Actin (IPR004000) - T[8-345] 1.0E-191 |
| PRINTS |
Actin (IPR004000) - T[29-38] 3.9E-58 - T[52-63] 3.9E-58 - T[64-86] 3.9E-58 - T[118-131] 3.9E-58 - T[143-162] 3.9E-58 - T[239-255] 3.9E-58 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[56-66] . |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[107-119] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTA_HUMAN | 97.361 % | 698 | 0 |
| ACTS_HUMAN | 97.361 % | 698 | 0 |
| ACTC_HUMAN | 97.654 % | 699 | 0 |