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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C8.163.v3....' > 
  2. Transcript 'KH2012:KH.L9.23.v1.A...' > 
  3. Region 'REG00000153' > 
  4. Transcript 'KH2012:KH.C5.143.v1....' > 
  5. Transcript 'Haaura.CG.MTP2014.S6...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S611.g05951.01.t

Possible name(s)

ACTA1; ACTA2; ACTC1

Gene model

Haaura.CG.MTP2014.S611.g05951

Location

S611 [44,424 / 45,663]

Sequences

Amino acid sequence

Length: 345

>Haaura.CG.MTP2014.S611.g05951.01.p
MSDGEEDTTAIVCDNGSGLVKSGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE
AQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANRE
KMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHNVPIYEGYALPHAIAR
LDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFEQEMATAASSTSLE
KSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANN
VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIG

Nucleotide sequence

Length: 1,035

>Haaura.CG.MTP2014.S611.g05951.01.t
ATGTCTGATGGTGAAGAAGATACAACTGCAATCGTCTGCGACAATGGATCAGGATTGGTT
AAATCTGGTTTTGCCGGTGATGATGCTCCAAGAGCAGTATTCCCTTCTATTGTAGGACGA
CCAAGACATCAAGGTGTTATGGTAGGAATGGGACAGAAAGACAGTTATGTTGGAGATGAA
GCACAAAGTAAAAGAGGAATTCTCACTCTCAAATATCCAATTGAACATGGAATCATCACC
AATTGGGATGATATGGAGAAAATATGGCATCATACCTTCTACAATGAGCTCCGTGTTGCT
CCTGAAGAACATCCAACTCTTCTCACAGAAGCTCCGTTGAATCCTAAAGCTAACAGAGAA
AAGATGACACAAATTATGTTTGAAACTTTCAATGTGCCTGCTATGTATGTTGCCATCCAG
GCTGTACTTTCTCTCTATGCCTCTGGAAGAACAACTGGTATTGTTCTTGATTCTGGTGAT
GGTGTTTCCCATAACGTACCAATCTATGAAGGATATGCTCTCCCTCATGCTATTGCACGA
TTGGATTTAGCTGGCCGTGATCTTACTGATTACCTAATGAAGATCCTCACAGAAAGAGGA
TACTCATTTGTTACGACTGCTGAACGAGAAATAGTTCGTGATATCAAAGAGAAACTGTGC
TATGTTGCTCTTGATTTCGAACAAGAAATGGCAACGGCAGCTTCCTCTACATCTCTGGAA
AAAAGTTATGAGCTTCCCGACGGTCAAGTCATCACTATCGGAAATGAGAGATTCCGTTGT
CCTGAAACCCTCTTCCAACCATCCTTCATTGGTATGGAATCTGCCGGTATTCATGAAACA
ACATATAACTCTATCATGAAATGCGATATTGACATTCGAAAAGATCTTTATGCAAACAAC
GTACTTTCCGGAGGAACCACCATGTATCCTGGTATTGCTGATCGTATGCAAAAAGAAATC
ACTGCTCTTGCCCCAAGTACCATGAAGATCAAAATCATTGCTCCTCCCGAACGTAAATAC
TCTGTATGGATCGGA

InterProScan

PANTHER
Actin (IPR004000) - T[5-345] 2.5E-243
Pfam
Actin (IPR004000) - T[6-345] 2.0E-126
SMART
Actin (IPR004000) - T[8-345] 1.0E-191
PRINTS
Actin (IPR004000) - T[29-38] 3.9E-58 - T[52-63] 3.9E-58 - T[64-86] 3.9E-58 - T[118-131] 3.9E-58 - T[143-162] 3.9E-58 - T[239-255] 3.9E-58
ProSitePatterns
Actin_CS (IPR004001) - T[56-66] .
ProSitePatterns
Actin/actin-like_CS (IPR020902) - T[107-119] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ACTA_HUMAN 97.361 % 698 0
ACTS_HUMAN 97.361 % 698 0
ACTC_HUMAN 97.654 % 699 0