- EST 'AHC0AAA223YO24_RM1' >
- Transcript 'Haaura.CG.MTP2014.S1...' >
- Region 'REG00001236' >
- Transcript 'Haaura.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S611.g05941.01.t
Possible name(s)
ACTA1; ACTA2; ACTC1
Gene model
Location
S611 [44,322 / 45,651]
Amino acid sequence
Length: 375
>Haaura.CG.MTP2014.S611.g05941.01.p
EEDTTAIVCDNGSGLVKSGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ
IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHNVPIYEGYALPHAIARLDLA
GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFEQEMATAASSTSLEKSYE
LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSG
GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
YDEAGPSIVHRKCF*
Nucleotide sequence
Length: 1,125
>Haaura.CG.MTP2014.S611.g05941.01.t
GAAGAAGATACAACTGCAATCGTCTGCGACAATGGATCAGGATTGGTTAAATCTGGTTTT
GCCGGTGATGATGCTCCAAGAGCAGTATTCCCTTCTATTGTAGGACGACCAAGACATCAA
GGTGTTATGGTAGGAATGGGACAGAAAGACAGTTATGTTGGAGATGAAGCACAAAGTAAA
AGAGGAATTCTCACTCTCAAATATCCAATTGAACATGGAATCATCACCAATTGGGATGAT
ATGGAGAAAATATGGCATCATACCTTCTACAATGAGCTCCGTGTTGCTCCTGAAGAACAT
CCAACTCTTCTCACAGAAGCTCCGTTGAATCCTAAAGCTAACAGAGAAAAGATGACACAA
ATTATGTTTGAAACTTTCAATGTGCCTGCTATGTATGTTGCCATCCAGGCTGTACTTTCT
CTCTATGCCTCTGGAAGAACAACTGGTATTGTTCTTGATTCTGGTGATGGTGTTTCCCAT
AACGTACCAATCTATGAAGGATATGCTCTCCCTCATGCTATTGCACGATTGGATTTAGCT
GGCCGTGATCTTACTGATTACCTAATGAAGATCCTCACAGAAAGAGGATACTCATTTGTT
ACGACTGCTGAACGAGAAATAGTTCGTGATATCAAAGAGAAACTGTGCTATGTTGCTCTT
GATTTCGAACAAGAAATGGCAACGGCAGCTTCCTCTACATCTCTGGAAAAAAGTTATGAG
CTTCCCGACGGTCAAGTCATCACTATCGGAAATGAGAGATTCCGTTGTCCTGAAACCCTC
TTCCAACCATCCTTCATTGGTATGGAATCTGCCGGTATTCATGAAACAACATATAACTCT
ATCATGAAATGCGATATTGACATTCGAAAAGATCTTTATGCAAACAACGTACTTTCCGGA
GGAACCACCATGTATCCTGGTATTGCTGATCGTATGCAAAAAGAAATCACTGCTCTTGCC
CCAAGTACCATGAAGATCAAAATCATTGCTCCTCCCGAACGTAAATACTCTGTATGGATC
GGAGGATCAATTCTTGCTTCTCTTTCGACCTTCCAGCAGATGTGGATCAGTAAACAAGAA
TACGATGAGGCAGGACCATCAATCGTACACAGAAAATGTTTCTAA
| PANTHER |
Actin (IPR004000) - T[2-373] 1.5E-266 |
| Pfam |
Actin (IPR004000) - T[2-374] 2.5E-148 |
| SMART |
Actin (IPR004000) - T[4-374] 8.8E-235 |
| PRINTS |
Actin (IPR004000) - T[25-34] 6.5E-58 - T[48-59] 6.5E-58 - T[60-82] 6.5E-58 - T[114-127] 6.5E-58 - T[139-158] 6.5E-58 - T[235-251] 6.5E-58 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[52-62] . - T[355-363] . |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[103-115] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTA_HUMAN | 97.594 % | 769 | 0 |
| ACTS_HUMAN | 97.326 % | 767 | 0 |
| ACTC_HUMAN | 97.861 % | 769 | 0 |