- Transcript 'Haaura.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S604.g05907.01.t
Possible name(s)
TMTC2; TMTC3; TMTC4
Gene model
Location
S604 [23,868 / 41,677]
Amino acid sequence
Length: 930
>Haaura.CG.MTP2014.S604.g05907.01.p
MNYRVEVLCFSVAVIAYVNTFQAEFVYDDNRAILKNADILPTTPLYKVFVHDFWGTPMIH
SGSHKSYRPITVLTFRINYVISGLQPWSYHVTNTLLHAITTWLFVIFMRTRIFVVKSKDQ
YDFRSLISGTYFGLIFALHPIHTEAVAGLVGRADVLATLFTLAALISYARICDLSNRAVS
DSARHRNESLQTTRKDVSATFCSKKNTVKINARMRRNPNKSLSWSKRNSFSEYPDNRSKT
RRKTKRMNNFNDGSKPFEANLSATQDKDLACRLNNPNILFQTSKLIPFLFAVLALLSKEQ
GICAFPLCAIYDIWVRNELGVVSVGRIILFPGTTAEKYRNLCIRVRTIILSTLILILLRI
VPTVLYQTGDHFSPSFSSSDNPASASNSFLTRTLTFHYLLAFNVWLLSFPSTLSYDWSMD
SIPLIETVWDSRNLFTLALYLVLTTISLRIAKTLRIRDEKFSLMWSVVSENKKQTLKSRT
SRKTKRNVSPHCELTTTLQLPNLTTHFPSENKLIFELDEVIETETACLDRRHNANTFNKY
DMISECKPSSRLKESVLDVNTGTIWLPCSFGENSPSIDNLDRTLSSIHHDGQMFPSQKEN
QERTNSSGYATDNSLDDQDEIACQKYDLRNCQSKFLQASGINDETGSFCSDSSFETLPEI
EEKHDLSPALTCHIPQNYDIMIMGLAMMVISFLPATNLFFYVGFVVAERLLYMPSMGYCI
LIVQGTWHMAPLLMSSRTNKQRIYKKFATAIILIPLLVSAAKTITRNADWKNEYTLYRSG
VIVNPAKSWANLGNVLKVSNKIAEAEFAYLKALNTRSNMADVHYNLGLLYQEQTRYDHAL
ERYNKAIIYRPTLAVAHLNRGIVLAALRRSFEAETKIANSTVLMVRAIIRCFRFWFRLKS
SRKKFFQNSVSLLQEAIYRISQITSSDTA*
Nucleotide sequence
Length: 2,790
>Haaura.CG.MTP2014.S604.g05907.01.t
ATGAATTATCGGGTTGAAGTTCTATGTTTCTCCGTGGCTGTGATCGCGTACGTCAATACT
TTTCAAGCGGAATTCGTCTACGACGACAATCGTGCGATACTGAAGAATGCCGATATCCTA
CCGACCACACCACTGTACAAAGTCTTCGTACACGATTTTTGGGGAACACCGATGATCCAT
TCGGGAAGTCACAAGTCTTATAGACCCATCACTGTGCTTACTTTCAGAATAAACTACGTT
ATATCCGGACTCCAGCCGTGGTCTTATCACGTAACAAATACCCTGCTCCACGCAATTACA
ACGTGGTTGTTTGTCATTTTCATGAGGACGAGAATCTTTGTTGTAAAGTCGAAGGATCAG
TACGATTTCAGGTCCCTCATTTCTGGTACGTATTTCGGTCTCATCTTCGCGTTACATCCT
ATTCACACCGAAGCAGTTGCCGGTCTGGTTGGACGAGCAGATGTGTTAGCAACGCTGTTC
ACCTTAGCAGCTCTGATTTCTTACGCGCGTATTTGTGACCTGAGCAACAGAGCGGTAAGT
GATTCAGCGCGACACCGAAACGAATCGTTACAAACAACAAGGAAAGACGTCTCGGCAACA
TTTTGTAGCAAAAAAAATACTGTCAAAATTAATGCCAGAATGCGGAGGAACCCCAATAAA
TCCCTTTCTTGGTCAAAACGAAACTCATTTTCGGAATACCCGGACAACCGTTCTAAAACA
AGAAGAAAAACCAAACGTATGAATAACTTTAACGATGGTTCCAAACCATTTGAGGCCAAT
TTGTCTGCTACTCAAGATAAAGATTTGGCATGTCGATTGAACAACCCGAATATATTATTT
CAAACATCCAAACTAATTCCATTCCTGTTCGCTGTACTGGCTCTACTCAGTAAGGAACAG
GGTATCTGTGCCTTCCCACTGTGTGCCATCTATGATATCTGGGTGAGAAATGAACTGGGT
GTCGTCTCAGTTGGCCGCATCATACTTTTTCCGGGTACCACTGCAGAAAAGTATCGAAAC
CTCTGTATTCGCGTACGGACGATTATTCTATCGACTCTCATTCTCATTCTACTTCGAATA
GTACCCACTGTGCTGTACCAAACTGGGGATCATTTTTCGCCCTCGTTTTCATCCTCGGAT
AATCCCGCGTCTGCCTCCAACTCGTTCTTAACTCGAACTTTGACCTTCCACTATTTGTTA
GCTTTCAATGTATGGTTACTGAGCTTCCCATCCACTCTCAGTTACGATTGGAGTATGGAC
AGCATTCCGCTGATTGAAACCGTTTGGGATTCCCGTAATCTCTTCACTTTAGCATTGTAT
TTGGTACTCACAACAATCTCTCTACGTATTGCCAAAACACTCAGAATTCGGGATGAGAAA
TTCTCCCTGATGTGGTCAGTGGTTAGCGAAAACAAAAAACAGACTCTGAAAAGCAGAACA
AGTAGAAAAACGAAACGAAATGTATCACCACACTGTGAATTAACCACCACCCTTCAGTTG
CCGAATCTTACTACACACTTTCCATCCGAAAACAAACTAATATTCGAACTGGATGAAGTC
ATAGAAACTGAAACAGCCTGTCTCGATCGAAGACATAACGCCAACACTTTTAATAAATAT
GACATGATTAGTGAATGCAAACCAAGTTCGCGTTTAAAGGAATCAGTCCTTGATGTTAAT
ACTGGAACAATATGGCTGCCATGTAGCTTCGGTGAAAATTCACCATCTATTGACAACCTC
GATCGGACTCTTAGCAGTATCCATCACGATGGTCAAATGTTTCCCTCTCAAAAAGAAAAC
CAAGAGCGGACGAACAGTTCGGGATATGCCACTGACAACAGTCTCGATGATCAGGATGAA
ATAGCATGCCAAAAATATGATCTCAGGAACTGTCAGTCGAAGTTTTTGCAAGCGTCTGGA
ATCAATGACGAAACCGGTTCGTTCTGCTCGGATTCGTCGTTCGAAACATTACCCGAAATC
GAAGAAAAACACGATCTCTCACCGGCGTTGACATGTCATATACCCCAAAACTATGACATC
ATGATAATGGGTTTGGCTATGATGGTTATCTCATTCCTCCCGGCCACCAATCTATTTTTT
TACGTCGGGTTCGTTGTTGCTGAAAGATTACTCTATATGCCAAGCATGGGATATTGCATT
CTCATTGTACAGGGCACCTGGCACATGGCACCTCTTTTAATGTCCTCCAGAACCAATAAA
CAAAGAATCTACAAGAAATTTGCAACTGCTATAATTCTTATACCTCTTCTCGTCTCCGCT
GCAAAAACAATCACGAGAAATGCAGACTGGAAGAACGAGTACACGTTGTACAGATCTGGT
GTGATTGTGAATCCAGCAAAATCGTGGGCAAACCTAGGAAATGTATTGAAAGTCAGCAAC
AAGATAGCTGAAGCCGAATTCGCGTATTTGAAGGCCCTGAACACAAGGAGTAATATGGCA
GATGTGCACTATAATCTAGGACTGTTGTATCAAGAACAAACGCGTTACGATCACGCTCTT
GAAAGATACAACAAAGCAATTATCTACAGACCAACTCTTGCCGTAGCCCACCTTAATCGT
GGAATTGTCCTGGCTGCTCTTCGGCGTTCGTTTGAAGCTGAAACTAAAATCGCGAATTCC
ACAGTGCTAATGGTCCGAGCAATTATTAGATGCTTTCGTTTTTGGTTTCGTTTAAAATCT
TCCCGGAAAAAGTTTTTTCAAAACTCTGTAAGTCTCTTGCAGGAAGCTATCTATCGTATA
TCGCAGATAACATCGAGCGACACTGCTTAA
| Pfam |
DUF1736 (IPR013618) - T[373-443] 1.1E-29 |
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[768-882] 1.3E-18 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[785-875] 3.8E-21 |
| ProSiteProfiles |
TPR_repeat (IPR019734) - T[786-819] 7.198 - T[820-853] 11.623 |
| ProSiteProfiles |
TPR-contain_dom (IPR013026) - T[786-853] 17.749 |
| SMART |
TPR_repeat (IPR019734) - T[786-819] 0.036 - T[820-853] 5.7E-5 |
| Pfam |
TPR_2 (IPR013105) - T[820-852] 2.9E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TMTC4_HUMAN | 40.909 % | 129 | 7.95E-31 |
| TMTC2_HUMAN | 46.667 % | 205 | 5.36E-55 |
| TMTC3_HUMAN | 46.471 % | 157 | 2.5E-39 |