- Transcript 'Haaura.CG.MTP2014.S5...' >
- Transcript 'Haaura.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S5.g00182.01.t
Possible name(s)
ARNT; ARNT2; ARNTL
Gene model
Location
S5 [131,283 / 136,140]
Amino acid sequence
Length: 563
>Haaura.CG.MTP2014.S5.g00182.01.p
MESGSMGKGSDPNLDDMSQADKERFARENHSEIERRRRNKMTAYITELSDMVPSCSALAR
KPDKLTILRMAVSHMKQLRGAMSGGAMDSAYKPAFLTDQELKHLVLESADGFLFVASCET
GLIIYVSDTVTAVLNQAHSDWIGHSLYDLIHSDDVTKVQEQLNISDTQNTGRILDMKTGT
VKKEGQQSSVRLCNGSRRAFICRMRCGKMQVSSSTPRYQHARNTLGAIGKDEDPHSVMHV
TGYIKPWPPSGYSGVDSQPDAMEDMSAQNQNASSNYCLVGIARLQITSHPSFGDLNPTMD
KSEFVSRHNFENTYTFVDMRVTNILGYQPQDLLGKKPAEFYHASDIEQVEETFNQVVLRK
GQVFSMMHRFRAQNGEYVLMRTSSFAFQNPYNNEVEYIVCTNSLVKPPQAQGMGDVTEHK
ANPVFNHPGNDKAMQGGIEQFGGKPTQSPDVQSPTTTLNYPPQNIGNHPQAAQMASQFSP
VSGATIGQVPWNNSGVSAGESVNPQYSQSLLDHYQGVLATSQWDVYYWCFSLSGITSGAR
ISSRWTATRNLSDTGYCFNNNYL
Nucleotide sequence
Length: 1,689
>Haaura.CG.MTP2014.S5.g00182.01.t
ATGGAGTCGGGCTCCATGGGAAAAGGAAGCGATCCAAACTTGGATGATATGTCGCAAGCG
GATAAGGAAAGGTTTGCGAGGGAGAATCATTCAGAGATTGAAAGGAGGCGAAGAAATAAG
ATGACTGCATACATCACAGAACTGTCTGATATGGTGCCAAGTTGCAGTGCTTTAGCAAGA
AAACCAGACAAACTCACCATACTTCGCATGGCTGTGTCACACATGAAACAATTACGTGGA
GCTATGTCAGGTGGTGCAATGGACAGCGCATATAAGCCTGCCTTCCTCACTGATCAAGAA
CTGAAACATCTTGTACTCGAATCGGCAGACGGTTTTCTTTTCGTTGCGTCGTGTGAAACA
GGACTGATCATTTACGTATCTGACACGGTCACAGCTGTGTTGAACCAGGCACATTCAGAC
TGGATTGGACACAGTTTGTACGATCTCATCCATTCTGATGATGTCACCAAAGTGCAGGAA
CAGCTGAATATCAGTGACACTCAAAATACTGGCCGTATACTAGATATGAAGACCGGAACC
GTGAAAAAGGAAGGTCAGCAAAGCTCTGTCAGATTATGCAATGGATCACGGCGTGCTTTC
ATTTGTCGCATGCGCTGTGGAAAAATGCAAGTTAGCAGCTCAACACCTAGATACCAGCAT
GCCAGAAACACTCTGGGAGCAATTGGAAAGGACGAAGATCCACACTCTGTAATGCATGTG
ACTGGCTACATCAAACCATGGCCTCCATCTGGGTACAGCGGTGTTGACAGCCAACCAGAT
GCAATGGAAGATATGTCTGCACAAAATCAAAATGCCAGTAGTAATTATTGTTTGGTTGGA
ATTGCACGTCTTCAGATCACCAGCCATCCAAGTTTTGGTGACCTCAACCCAACCATGGAC
AAAAGTGAATTTGTGTCACGGCATAATTTTGAAAACACTTATACTTTCGTCGACATGCGC
GTTACAAACATTCTCGGGTACCAACCACAGGATTTACTGGGGAAAAAGCCTGCCGAATTT
TATCATGCAAGTGACATTGAGCAAGTTGAAGAAACTTTTAATCAAGTTGTGCTGCGAAAG
GGCCAGGTGTTCTCAATGATGCATCGGTTCCGTGCACAAAATGGAGAGTACGTGTTGATG
AGGACAAGTTCTTTTGCATTTCAGAATCCGTACAACAATGAAGTAGAATATATTGTGTGT
ACCAATTCTCTTGTTAAACCACCACAGGCACAAGGTATGGGTGATGTCACAGAGCATAAG
GCAAATCCAGTTTTTAACCATCCTGGAAATGATAAGGCTATGCAGGGAGGCATTGAACAG
TTTGGAGGTAAACCAACGCAGTCACCTGACGTGCAGTCACCTACAACGACTCTGAACTAT
CCTCCACAGAATATAGGAAACCATCCGCAGGCTGCACAGATGGCATCCCAGTTTAGCCCA
GTGTCTGGAGCTACTATCGGTCAGGTTCCTTGGAACAATTCTGGAGTTTCTGCTGGAGAA
TCTGTGAATCCTCAGTATTCACAATCGCTCTTGGATCATTATCAAGGTGTATTAGCAACC
TCACAGTGGGATGTTTACTACTGGTGTTTCAGCCTATCAGGCATCACCTCCGGTGCCAGG
ATTTCCAGCAGATGGACGGCAACAAGAAACCTATCCGACACAGGTTACTGTTTTAATAAT
AACTATCTA
| Gene3D |
HLH_DNA-bd_sf (IPR036638) - T[15-81] 1.3E-21 |
| ProSiteProfiles |
bHLH_dom (IPR011598) - T[25-78] 16.971 |
| CDD |
bHLH_dom (IPR011598) - T[27-79] 5.24487E-15 |
| SUPERFAMILY |
HLH_DNA-bd_sf (IPR036638) - T[27-111] 2.75E-15 |
| Pfam |
bHLH_dom (IPR011598) - T[27-78] 6.4E-15 |
| SMART |
bHLH_dom (IPR011598) - T[31-84] 3.3E-13 |
| PRINTS |
Nuc_translocat (IPR001067) - T[40-55] 9.9E-74 - T[60-80] 9.9E-74 - T[91-114] 9.9E-74 - T[116-135] 9.9E-74 - T[148-166] 9.9E-74 - T[194-207] 9.9E-74 - T[235-254] 9.9E-74 - T[303-320] 9.9E-74 |
| ProSiteProfiles |
PAS (IPR000014) - T[98-169] 11.488 - T[315-360] 12.131 |
| SMART |
PAS (IPR000014) - T[100-167] 9.2E-9 - T[290-358] 0.58 |
| Pfam |
PAS_fold (IPR013767) - T[104-206] 2.9E-10 |
| CDD |
PAS (IPR000014) - T[109-198] 1.5263E-8 - T[302-399] 5.01598E-12 |
| SUPERFAMILY |
PAS-like_dom_sf (IPR035965) - T[110-164] 2.51E-12 - T[191-226] 2.51E-12 - T[303-403] 2.51E-22 |
| TIGRFAM |
PAS (IPR000014) - T[314-398] 1.4E-7 |
| SMART |
PAC (IPR001610) - T[365-408] 0.006 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARNT_HUMAN | 61.055 % | 497 | 1.78E-168 |
| ARNT2_HUMAN | 57.644 % | 474 | 1.57E-160 |
| BMAL1_HUMAN | 42.559 % | 321 | 3.76E-102 |