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  1. Transcript 'Haaura.CG.MTP2014.S5...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S5.g00165.01.t

Possible name(s)

DENND1A; DENND1B; DENND1C

Location

S5 [26,052 / 28,200]

Sequences

Amino acid sequence

Length: 716

>Haaura.CG.MTP2014.S5.g00165.01.p
MGSEQDRVKKIFHCFFIAELNSTNDTTLKYVYPEEDGEEKELQKFQEFCFPFEKSSPSIG
MRQQHFTFMLTDLEKRHKYGFCKLTGGKLCFCFVSYLPWFEIFYKTLNLMCAVYSRDDVD
TVTTLLQGLYDSAIPKPNKIITIGTSLSFSLPNESDLPSIPENRNLMEYYSAIKPRNMME
IFAALMFERRVMFTSSSLSILTGCIYAAESLINPLSWQHIYIPVLPPKIIDYCSAPMPFL
IGVHSSLMPSIEKASMTEGVVLVDIDNNQITTPYNDLETMPSEVVSYLRSLLNKPNVAVS
TQLSQAFLKTQARLIGSYRNALKFHMGSSIVFDEQTFVDTHKSSTRRTFAEALVQLQAFQ
QFVEKRLEMLNNGIGFRDAFENEITILQTQTGGNDSTMYKEWLSVTKKGGEIINNVKKRA
KGNMRIARESARQGIKDVKNAMKTSEDEARNAPPKLKSRHSLRENVTSLRPPRPPPPKHP
NQKTKQKPPPRPAPPSPSSRNVRHYTVIEESEEDDDINDFLSDCDSPGTGTQSSSNISLL
DEMNAVLLGEGFSDLPLLIDLSSPTNAQTTFKNASTDFLVDFEEEEDEMLIENDIIKPSV
SQITARSNSSLLDDNFACDRFSILPAHRTSEIRKAERVNQSVETPLANYNVSSSSDLLSS
ITLGNLHSNRSSDVNWAHFGSEHTAGSTQSGDPEFIASQQQQSTRQNINEPLIFFD

Nucleotide sequence

Length: 2,148

>Haaura.CG.MTP2014.S5.g00165.01.t
ATGGGATCGGAACAAGACAGGGTCAAGAAAATATTCCATTGTTTTTTCATTGCCGAATTA
AATTCTACAAATGATACAACACTGAAGTATGTCTACCCAGAAGAAGACGGCGAGGAAAAA
GAACTTCAGAAATTTCAAGAATTTTGTTTTCCTTTCGAGAAATCCAGCCCGTCAATCGGT
ATGAGACAGCAGCACTTCACGTTTATGCTGACTGACTTGGAAAAGCGGCATAAATATGGA
TTTTGCAAACTTACTGGAGGAAAACTGTGTTTTTGTTTTGTAAGCTATTTGCCTTGGTTC
GAAATATTTTACAAAACATTGAACTTAATGTGTGCAGTGTACAGTCGTGATGACGTAGAT
ACTGTCACTACATTGTTGCAAGGATTATATGACTCTGCTATACCTAAACCAAACAAAATA
ATTACCATAGGCACTTCCCTATCGTTTAGTTTACCCAACGAGTCCGACCTTCCATCTATA
CCAGAGAATAGAAATCTCATGGAGTATTACTCAGCAATTAAACCCCGGAACATGATGGAA
ATATTTGCGGCTCTCATGTTTGAGAGACGCGTGATGTTTACTTCTTCGAGTCTAAGCATA
TTGACTGGCTGCATTTACGCCGCTGAATCGTTGATAAACCCATTGTCGTGGCAACACATA
TATATTCCAGTCTTGCCACCAAAGATAATAGACTATTGCTCGGCACCCATGCCATTTCTT
ATTGGAGTTCATTCATCCCTCATGCCATCTATCGAAAAAGCATCCATGACAGAGGGTGTA
GTACTTGTTGACATTGACAACAATCAAATCACCACTCCTTATAACGACTTAGAAACGATG
CCCAGTGAAGTGGTTTCATACCTTCGGTCTTTGCTTAACAAGCCCAATGTTGCAGTCAGC
ACACAACTTTCCCAAGCGTTTTTGAAGACTCAGGCTCGATTGATAGGAAGTTATCGCAAC
GCCTTGAAATTTCATATGGGAAGTTCAATCGTCTTTGATGAACAAACTTTTGTGGACACG
CACAAGTCAAGTACGAGGCGGACGTTTGCTGAGGCTCTTGTGCAGCTCCAGGCATTTCAG
CAGTTTGTAGAAAAACGACTGGAAATGTTGAATAACGGCATAGGATTTCGGGACGCTTTT
GAGAATGAGATAACAATATTGCAAACACAAACTGGGGGAAATGACAGCACAATGTACAAA
GAATGGTTGTCAGTTACGAAAAAGGGAGGCGAAATTATAAATAACGTTAAGAAGAGAGCC
AAAGGCAACATGCGGATAGCTAGGGAATCTGCTCGTCAAGGTATCAAAGATGTTAAAAAT
GCAATGAAGACAAGTGAGGATGAAGCAAGAAATGCTCCTCCTAAATTGAAAAGTAGGCAT
TCATTACGGGAAAACGTTACTTCCCTTAGGCCACCTAGGCCTCCACCTCCGAAGCACCCA
AATCAAAAGACAAAACAGAAACCTCCGCCAAGACCTGCGCCACCGAGCCCGTCAAGCAGG
AATGTTCGTCATTACACAGTGATAGAAGAATCTGAAGAGGATGACGACATCAATGATTTT
CTGAGTGATTGCGACAGTCCCGGGACAGGAACCCAGTCGTCTTCGAATATATCTTTGCTG
GATGAAATGAATGCTGTTCTATTAGGAGAGGGGTTCAGTGATTTACCGCTCCTCATTGAC
CTGTCTTCTCCCACGAATGCACAAACTACTTTCAAAAATGCTTCTACTGATTTCTTGGTT
GATTTTGAAGAGGAAGAAGATGAAATGTTGATTGAAAACGATATCATAAAACCAAGTGTT
TCTCAAATTACCGCACGAAGCAATTCATCGTTATTAGATGACAACTTTGCTTGCGATCGT
TTCAGCATTCTCCCTGCTCACCGAACGAGCGAAATTCGGAAAGCAGAAAGAGTCAATCAG
TCTGTAGAAACACCATTAGCGAACTACAATGTTTCCAGTAGTTCAGATTTACTTAGCAGC
ATTACATTGGGAAATTTACACAGTAATCGGAGTAGCGATGTGAACTGGGCGCATTTTGGA
AGTGAACACACTGCTGGCAGTACCCAAAGTGGTGATCCCGAGTTCATTGCCTCTCAGCAA
CAACAGAGTACCCGGCAGAATATAAATGAACCTTTGATATTTTTCGAT

InterProScan

SMART
uDENN_dom (IPR005113) - T[8-86] 2.7E-6
ProSiteProfiles
Tripartite_DENN (IPR037516) - T[13-373] 50.417
Pfam
uDENN_dom (IPR005113) - T[28-82] 1.5E-7
SMART
cDENN_dom (IPR001194) - T[86-268] 3.3E-56
Pfam
cDENN_dom (IPR001194) - T[90-268] 2.7E-46
SMART
dDENN_dom (IPR005112) - T[299-366] 1.3E-11
Pfam
dDENN_dom (IPR005112) - T[332-381] 7.4E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DEN1A_HUMAN 39.293 % 387 1.75E-121
DEN1B_HUMAN 40.312 % 374 4.07E-119
DEN1C_HUMAN 38.043 % 333 6.09E-103