- Transcript 'Haaura.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S58.g01407.01.t
Possible name(s)
RDH12; RDH13
Gene model
Location
S58 [38,423 / 40,338]
Amino acid sequence
Length: 353
>Haaura.CG.MTP2014.S58.g01407.01.p
MFSFVRGLRLLISVFYPIFSTLLAQMCAPTQSEVMTSSEQSDSAKGGWVTSDVRLKGKTV
LITGGNSGIGFETAVDLAKREATVIIACRDESKGDEAVTEIRNITGSKTVFSKHLDLSSF
QNIRRFAEEFIDTEARLDILINNAGIMMCPQSITEDGFETHFGVNHLGHFLLTNLLLDLL
KKSSPSRIITLSSVMHTELYNAYIHWDDLNLKKSYFPRDAYSQSKLMNVLFSRELSKRLT
GTGVTTYCVHPGLVRTNILRHVGTNWSCWDFIFSLVTKTTRRFWKTPEHGAQTSIYCAIA
PEIENDSGKYYNTILFQINHIVIAMKKPKQEWEETTMQQSDYGKSRRRLSHP*
Nucleotide sequence
Length: 1,158
>Haaura.CG.MTP2014.S58.g01407.01.t
AACTCTTCTATGCTGCTTGAACTTTTTACCTTGGCGAAAGGCATGCGTTGCAGTACTACT
ACTACATTAAGAAGAGTACTTCAACTCTCAAATGTTTTCATTCGTCCGTGGTCTACGGCT
ATTGATCAGTGTGTTTTATCCCATTTTCTCTACGTTACTGGCACAAATGTGTGCACCTAC
GCAGTCGGAAGTAATGACTAGTAGCGAACAATCAGACTCGGCTAAAGGAGGATGGGTAAC
TAGCGATGTCCGTTTAAAAGGAAAAACAGTTTTGATAACTGGAGGAAACTCAGGAATCGG
TTTTGAAACTGCTGTAGATTTAGCAAAGCGTGAAGCAACGGTCATAATAGCATGTCGTGA
CGAATCGAAAGGAGATGAGGCCGTAACAGAGATTCGAAACATAACTGGATCGAAGACGGT
TTTCTCCAAGCACTTGGACTTATCTTCGTTTCAAAATATTAGAAGATTTGCGGAAGAATT
CATTGATACGGAGGCACGGCTAGATATTCTGATTAACAATGCAGGTATAATGATGTGTCC
TCAGTCAATAACCGAAGATGGATTTGAAACGCATTTCGGTGTAAATCATCTTGGTCACTT
TCTCTTGACCAATCTATTACTGGATTTATTAAAGAAAAGTTCGCCTAGTCGGATCATTAC
ACTGTCGTCGGTTATGCATACCGAATTGTACAACGCTTATATACACTGGGATGATTTGAA
TTTGAAGAAATCTTATTTCCCTAGGGATGCATACAGTCAAAGCAAGCTGATGAATGTATT
GTTTTCAAGAGAACTGAGTAAACGATTGACCGGTACAGGTGTAACAACTTACTGCGTACA
TCCGGGCTTAGTGAGAACGAATATCTTGCGGCATGTAGGAACAAACTGGTCTTGCTGGGA
CTTCATCTTCAGCCTTGTTACTAAAACCACGAGACGATTTTGGAAGACGCCAGAACATGG
AGCACAAACATCAATATATTGCGCAATTGCACCGGAGATAGAAAACGATTCTGGAAAATA
TTACAATACTATACTGTTTCAAATCAACCATATAGTGATTGCCATGAAGAAACCGAAGCA
AGAATGGGAAGAGACGACGATGCAGCAAAGCGACTATGGGAAATCACGCAGGAGATTATC
TCATCCGTGAATACAGAT
| SUPERFAMILY |
NAD(P)-bd_dom_sf (IPR036291) - T[55-312] 1.65E-58 |
| Pfam |
SDR_fam (IPR002347) - T[58-197] 4.4E-27 |
| PRINTS |
SDR_fam (IPR002347) - T[59-76] 9.9E-17 - T[135-146] 4.9E-6 - T[135-146] 9.9E-17 - T[180-196] 9.9E-17 - T[186-194] 4.9E-6 - T[221-240] 4.9E-6 - T[221-240] 9.9E-17 - T[242-259] 9.9E-17 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RDH11_HUMAN | 47.569 % | 243 | 2.04E-78 |
| RDH13_HUMAN | 46.452 % | 245 | 2.14E-79 |
| RDH12_HUMAN | 52.809 % | 249 | 5.49E-81 |
