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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S5...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S574.g05781.01.t

Possible name(s)

TBC1D4

Location

S574 [10,602 / 12,623]

Sequences

Amino acid sequence

Length: 545

>Haaura.CG.MTP2014.S574.g05781.01.p
MPITDPLLKSMKYLIEEFHSIGEPVTDSSPYLASFCQTVEHALTQGIKLGPWESLKEDGQ
SMKRKKFWTMLEHFQTSGPIPLTLSSTINMTQQNIRLKFGDGKLRFVIRSSLMRKSIHVL
VEFLMSRRQDLEETWYHGKQELQMMSQAARKEIQNKGLPIVTEEPLAEQFRSLLLTVSTS
LTFELSMENSYFLDQTWNIPDMRTVEFVPTEELGLALIYIDGYGIVAKTKAGSAAADTTE
ISLGDLLVSMNGKPLFPAKYNGENDVMDAWKKCKRKGRPCQLTVIKPRCPATGGVFNPMR
SILSQYQDYMEIYYDKKQKKLEKEMQNAEEKSALSMAPSTLAKGRAPVADGREGCGCYQV
RYVGEIVVGQHGGMGQVEGVIKTAIQRRSAFTIMNVIVEITEISVITRNCNERRTRKKCR
QCRDGKKCEQCEREETELREIQSLTKRNKNTGMNNTGISGDDDLSSSAISPGDSNIIFRH
KFADISSCGKIVTDENHFCYIAGDTFCTISKQFKGYVFEARSISQARLILNNIYQGFKRT
TWFM*

Nucleotide sequence

Length: 1,635

>Haaura.CG.MTP2014.S574.g05781.01.t
ATGCCGATAACAGACCCTTTGCTGAAAAGCATGAAATATCTAATTGAGGAATTTCATTCT
ATTGGAGAGCCAGTGACGGATTCTAGCCCGTACCTGGCCTCGTTTTGTCAAACTGTTGAG
CATGCGTTGACGCAGGGAATTAAATTGGGACCATGGGAATCCTTGAAAGAAGATGGACAG
AGCATGAAAAGAAAGAAATTCTGGACCATGTTGGAACACTTTCAAACAAGCGGACCGATC
CCACTGACTCTGTCATCCACAATCAATATGACGCAGCAAAACATCAGATTAAAGTTTGGA
GATGGGAAATTAAGATTCGTAATAAGAAGCAGCCTGATGCGGAAATCGATTCACGTCCTC
GTCGAGTTTCTGATGTCCAGGCGTCAAGATTTGGAGGAAACCTGGTACCACGGTAAACAG
GAGTTGCAAATGATGTCGCAGGCGGCGAGAAAAGAAATTCAGAACAAAGGATTGCCAATA
GTAACCGAGGAACCTCTTGCAGAACAATTTAGATCCTTGCTGTTAACAGTGTCCACCTCT
CTGACATTTGAACTGAGCATGGAAAATTCCTATTTTTTGGACCAGACGTGGAATATCCCG
GACATGAGAACGGTAGAATTCGTACCAACCGAAGAACTGGGCCTTGCCCTCATTTATATT
GATGGATACGGAATAGTAGCAAAAACCAAAGCGGGAAGCGCCGCAGCAGACACGACTGAA
ATTAGCCTCGGTGATTTGCTGGTGTCGATGAACGGTAAGCCTCTTTTCCCTGCCAAATAC
AACGGAGAAAACGACGTCATGGATGCTTGGAAAAAGTGCAAACGCAAAGGAAGACCATGT
CAATTGACGGTGATCAAGCCGAGATGCCCTGCTACAGGAGGAGTGTTCAATCCGATGCGA
TCCATACTGTCCCAGTATCAAGATTATATGGAGATTTATTACGATAAAAAGCAAAAGAAA
TTGGAAAAAGAAATGCAGAACGCTGAAGAAAAGAGTGCACTGTCGATGGCGCCATCGACG
CTCGCCAAGGGCAGAGCTCCGGTCGCAGACGGCAGGGAGGGATGCGGATGCTACCAAGTA
CGGTACGTCGGAGAGATCGTTGTGGGCCAGCATGGTGGGATGGGGCAGGTAGAAGGGGTC
ATTAAAACCGCGATACAGCGTAGATCGGCATTTACGATAATGAACGTTATTGTTGAAATT
ACCGAAATTTCTGTAATCACAAGAAATTGCAACGAAAGAAGAACGAGAAAGAAGTGCCGG
CAGTGTCGCGATGGTAAAAAGTGTGAACAATGCGAAAGGGAAGAAACCGAGCTGAGAGAA
ATTCAATCGCTGACCAAGAGAAATAAGAACACTGGGATGAATAATACCGGAATATCTGGC
GACGACGATCTTTCATCCAGCGCTATTTCTCCCGGCGACAGCAATATTATTTTCAGGCAT
AAATTTGCGGACATTTCGAGTTGCGGTAAAATTGTGACGGACGAAAATCATTTTTGCTAT
ATAGCCGGTGACACTTTCTGCACTATTTCGAAACAGTTCAAAGGTTACGTGTTCGAGGCC
AGATCGATAAGCCAGGCCAGGCTGATCCTCAATAATATATATCAGGGATTCAAGAGGACT
ACTTGGTTTATGTGA

InterProScan

SUPERFAMILY
Run_dom_sf (IPR037213) - T[3-133] 4.32E-13
ProSiteProfiles
Run_dom (IPR004012) - T[26-190] 12.547
SUPERFAMILY
PDZ_sf (IPR036034) - T[197-289] 1.86E-6
ProSiteProfiles
PDZ (IPR001478) - T[202-255] 8.587

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value