Aniseed - Transcript Card

Clone 'cima876497' >
Transcript 'Haaura.CG.MTP2014.S5...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S545.g05656.01.t

Possible name(s)

THNSL1; THNSL2

Gene model

Haaura.CG.MTP2014.S545.g05656

Location

S545 [7,243 / 10,711]

Sequences

Amino acid sequence

Length: 486

>Haaura.CG.MTP2014.S545.g05656.01.p
MEYTYTRCNTKTISFEEALFSGIAADGSLIVPKTIPQVDLKTLIKWKNLSYVEIVKQVVS
LYVSPNEIPRKNQEALIDNAFAKFDIPEVVRKKTFGDLNVMELWHGPTLAFKDLAMSCVG
EFINYFLSKKKKHVIVLVATSGDTGSSAIEAMRGKDNIDIIVLLPHKKISKVQELMMTTV
LESNVHVYAGEGVSDEFDAILKKLFSDGKFASKNNLCSINSINWGRVMVQIAHHIFMYLQ
VAQKIGEPVDIIVPTGGCGNITSGLYAQAMGVPVKFVCVVNQNDIVHRAVSNNDFSLADT
VVQTIASAMDIQVPLQFDRIFWIVSKGNSEIVKEIMETFEKEGKATIPEDLHCELKRSIR
TAVVMHNDIIKAMKRCHADNKYIACPHTCTAMAYHYGFSEYGTRKTTGTRRANNSLVPAV
CVGTASAAKFPEVVEKAGLKPDEPPETVKALFKKASRFCLLRKGDDWEKMMRDKILSVKH
HHQLV*

Nucleotide sequence

Length: 1,458

>Haaura.CG.MTP2014.S545.g05656.01.t
ATGGAGTACACCTACACCAGATGTAATACAAAAACGATAAGTTTTGAAGAAGCTCTGTTT
TCTGGTATTGCTGCAGACGGTTCGCTGATTGTACCCAAAACTATTCCTCAAGTGGATTTG
AAGACACTGATAAAATGGAAAAACCTTTCCTACGTGGAGATTGTCAAACAAGTCGTCTCT
CTATACGTCTCACCGAACGAAATTCCGAGAAAAAATCAAGAAGCTTTGATCGACAATGCG
TTCGCAAAATTTGACATCCCAGAAGTCGTGAGGAAGAAAACTTTCGGCGATCTCAACGTC
ATGGAGCTTTGGCACGGACCAACATTGGCTTTCAAAGACCTTGCAATGTCCTGTGTTGGA
GAATTCATCAATTACTTTTTATCGAAGAAGAAGAAACACGTCATCGTGTTGGTCGCTACT
TCAGGAGACACTGGTTCTTCTGCCATTGAAGCTATGCGTGGCAAGGATAATATTGACATC
ATAGTTCTTCTACCACACAAAAAGATTTCCAAAGTACAGGAACTCATGATGACTACAGTA
CTGGAAAGCAATGTTCATGTATATGCTGGAGAAGGAGTCAGTGACGAATTTGATGCCATA
CTGAAAAAATTATTCTCCGACGGTAAATTTGCATCGAAGAACAATCTTTGCAGCATTAAT
TCAATCAACTGGGGCAGAGTGATGGTCCAGATAGCACATCACATTTTCATGTATCTGCAA
GTCGCCCAGAAGATTGGAGAACCTGTTGATATCATTGTACCAACAGGAGGATGTGGCAAT
ATCACTTCGGGCTTATACGCACAAGCTATGGGCGTTCCTGTAAAGTTTGTCTGTGTTGTC
AATCAGAATGATATTGTGCATAGAGCTGTATCAAATAATGATTTCAGTTTGGCGGATACA
GTGGTCCAAACAATCGCATCTGCAATGGACATACAGGTGCCACTTCAATTCGACCGCATT
TTTTGGATTGTTTCTAAAGGAAACTCTGAAATCGTTAAAGAAATAATGGAAACGTTTGAA
AAAGAGGGAAAAGCAACTATTCCTGAGGATTTGCATTGCGAGTTGAAGAGAAGCATCAGG
ACTGCTGTTGTAATGCACAATGACATTATCAAGGCAATGAAGAGATGCCATGCAGATAAC
AAGTATATAGCTTGTCCTCATACGTGCACAGCAATGGCATATCATTATGGATTTTCTGAA
TATGGTACTAGAAAAACTACAGGAACCAGGCGAGCAAACAACAGTTTGGTTCCTGCTGTT
TGCGTCGGGACCGCGTCCGCTGCAAAGTTTCCAGAAGTGGTGGAAAAGGCAGGTTTGAAA
CCAGATGAGCCGCCAGAAACAGTAAAGGCACTATTCAAAAAGGCTTCGAGATTCTGCCTT
CTAAGAAAAGGGGACGACTGGGAAAAAATGATGCGGGATAAAATTTTATCCGTAAAGCAT
CACCATCAACTTGTGTGA

InterProScan

SUPERFAMILY	Trypto_synt_PLP_dependent (IPR036052) - T[1-461] 7.06E-121
Gene3D	Thr_synth_N_sf (IPR037158) - T[1-86] 3.3E-22
Pfam	Thr_synth_N (IPR029144) - T[3-81] 2.4E-19
TIGRFAM	Thr_synthase-like (IPR004450) - T[67-435] 5.5E-58
Pfam	PLP-dep (IPR001926) - T[104-393] 3.1E-14

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
THNS2_HUMAN	46.25 %	456	1.52E-157
THNS1_HUMAN	26.754 %	169	1.14E-45