- Transcript 'Haaura.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S52.g01261.01.t
Possible name(s)
CWC22; NOM1
Gene model
Location
S52 [43,146 / 46,951]
Amino acid sequence
Length: 800
>Haaura.CG.MTP2014.S52.g01261.01.p
MMKKGKRKRPCPQVTSVMSKVFERYGYQEGNDENPKSGETFVKGRKQKRREMKIQRQQVK
QKHFEKLSKRVKVDDKVERDVNVKQSVLERSNERQAVKVVRKTTIQEKRNKVFRKENIQD
DKIISKLEKKLFLHKRKNKSKLPKSFCDSGLDYVLNVLDGGGGSSDGESATSGQEDFFLD
DKVPSKEEENIKKNSADVSSYEDADENLIVSDEEQEDSDRSEHLEEEDQDIQEECQESVN
VTDESRGDEEVSNELAESKDIADLMPAKNFSKYIPPALRKMMMTDSNEKTRQLTKKIKGL
YNKLSDANLNSICNEIETIYLENSRAVTNQMISDMILEQFTESDPVPENLVMETAMLITV
LSKRIAIEVLAHFYEAISVKLHSILTKPELQYSRNQGKATNNLVQLLGCLYQLKSTDSKV
LQDIFHLLISSFAEKDIELMLDILNKVGFLLRKDDPQSLQDIMKEISVKSKECKCDNNDG
SRMSFMLNILMAVKNNNVRKVTGYDPNLVTARRKRVVSLLQTKKGIVNSESFPSVALKDF
LNAEINGRWWIVGSSWSGRPMLKNQEDTRDEMKDIENSISKSVINAAKSQRMNTDVRKKI
FYAVMTADDYIEAFEKVTKLGLKGKQLREIAYVIVNCCQQGKSFNPYFVYLLNRFCQSDR
QFIISLQCAMWDRFKLVGSLKKVQLDNIAQLLSNLIVKEAVPVSCLKAIDFAEMDKPMVD
FLRSLLCLIVENCGSIDQLKTVFSPLSSSTKFAFVRQGLQLFLGHFMLADKSFIAAHAST
EESLNTIVNVLSRSSFAGL*
Nucleotide sequence
Length: 2,400
>Haaura.CG.MTP2014.S52.g01261.01.t
ATGATGAAGAAGGGAAAGCGTAAGCGGCCCTGCCCACAAGTAACATCAGTTATGAGTAAG
GTGTTTGAGCGATATGGTTACCAAGAAGGCAACGATGAAAATCCGAAGTCGGGTGAGACC
TTCGTAAAAGGAAGAAAACAAAAACGAAGGGAAATGAAAATCCAACGCCAACAAGTGAAA
CAAAAACATTTTGAAAAACTGTCAAAGCGAGTTAAAGTAGACGACAAGGTTGAACGGGAT
GTAAATGTGAAACAATCTGTATTGGAGCGGTCCAATGAAAGACAAGCTGTGAAAGTAGTT
AGGAAAACCACTATTCAAGAAAAGCGAAATAAAGTGTTTAGGAAAGAAAATATTCAAGAC
GATAAAATTATAAGTAAACTTGAAAAGAAACTTTTCCTGCACAAAAGGAAAAATAAGTCA
AAATTGCCCAAATCTTTTTGCGACAGTGGGTTAGATTATGTTTTGAATGTTCTCGATGGC
GGAGGAGGATCTAGTGATGGAGAATCGGCAACCTCAGGCCAAGAGGATTTCTTCTTGGAT
GACAAGGTTCCTTCTAAAGAGGAGGAAAATATCAAGAAGAATTCTGCTGATGTATCCAGT
TATGAAGATGCTGATGAAAATTTGATAGTATCTGATGAGGAGCAGGAAGATTCTGATAGA
TCAGAACATCTTGAAGAAGAAGATCAAGATATCCAAGAGGAATGTCAAGAATCTGTGAAT
GTCACTGATGAATCTCGAGGTGATGAAGAGGTCTCTAATGAACTAGCTGAGTCTAAAGAT
ATTGCCGATCTGATGCCTGCAAAAAATTTTAGCAAATACATCCCTCCCGCTTTAAGAAAG
ATGATGATGACGGACTCCAATGAGAAAACAAGGCAGTTGACCAAAAAGATTAAAGGACTT
TACAACAAGCTTAGCGATGCCAATCTTAACAGTATTTGTAACGAGATCGAGACGATTTAC
TTAGAGAATAGTCGGGCTGTCACGAACCAAATGATTTCCGATATGATTTTAGAACAGTTC
ACTGAATCGGATCCCGTTCCAGAAAACTTAGTGATGGAGACGGCAATGTTGATCACTGTT
CTTAGTAAAAGAATTGCTATTGAGGTTCTTGCTCATTTCTATGAAGCGATCTCGGTTAAA
CTACATTCGATTCTCACAAAACCAGAACTACAGTACTCAAGAAATCAAGGCAAGGCAACC
AACAATCTTGTACAATTGCTTGGCTGTTTGTATCAGCTCAAAAGCACAGACAGCAAGGTT
CTGCAGGATATTTTTCACCTTCTCATTTCGTCATTTGCCGAAAAAGACATCGAACTCATG
TTGGATATCCTCAATAAAGTCGGATTTCTTTTGAGGAAGGATGATCCACAATCCTTACAA
GATATTATGAAGGAGATTTCCGTTAAATCTAAAGAGTGCAAGTGTGACAACAATGATGGT
TCCCGGATGTCATTTATGCTGAACATTCTAATGGCTGTGAAAAATAACAATGTTAGAAAA
GTTACTGGTTACGATCCTAACTTGGTTACAGCTCGTAGGAAAAGGGTTGTGTCACTGCTT
CAAACTAAGAAAGGAATTGTGAACTCGGAATCATTTCCATCCGTGGCATTGAAAGATTTT
TTAAATGCTGAAATTAATGGTCGATGGTGGATAGTTGGCAGTTCCTGGTCCGGACGACCC
ATGCTCAAAAATCAAGAAGATACCAGAGATGAAATGAAGGACATCGAAAATTCTATTTCC
AAGAGTGTGATCAACGCTGCTAAATCGCAAAGAATGAACACCGACGTCAGAAAAAAGATA
TTTTATGCTGTAATGACCGCCGATGATTATATAGAAGCATTTGAAAAAGTTACTAAATTG
GGACTAAAGGGAAAGCAATTGCGTGAAATCGCTTACGTCATCGTGAACTGTTGCCAGCAG
GGAAAATCATTCAATCCATACTTTGTTTATTTGTTGAACAGATTCTGTCAAAGTGACAGG
CAGTTCATTATAAGCTTGCAGTGTGCAATGTGGGACAGATTTAAACTCGTTGGTTCTTTG
AAAAAAGTGCAACTCGACAACATCGCTCAGCTTTTGTCAAATCTGATAGTTAAGGAAGCT
GTTCCAGTGTCCTGTCTCAAGGCAATTGACTTTGCTGAAATGGACAAACCAATGGTTGAC
TTTCTTCGTTCCCTGCTGTGTTTGATTGTGGAAAATTGTGGTTCTATTGACCAACTCAAA
ACAGTTTTCAGTCCCTTGAGCTCTTCCACAAAGTTCGCTTTCGTTAGACAGGGCTTGCAG
TTGTTTCTTGGCCATTTCATGTTAGCCGATAAAAGTTTTATTGCTGCGCATGCCTCTACG
GAGGAATCACTGAACACTATAGTCAATGTATTAAGTAGATCTAGTTTTGCAGGCCTTTAG
| Gene3D |
MIF4-like_sf (IPR016021) - T[257-538] 2.7E-45 |
| SUPERFAMILY |
ARM-type_fold (IPR016024) - T[288-498] 9.87E-24 |
| SMART |
MIF4G-like_typ-3 (IPR003890) - T[294-497] 2.1E-11 |
| Pfam |
MIF4G-like_typ-3 (IPR003890) - T[295-497] 3.7E-11 |
| ProSiteProfiles |
Initiation_fac_eIF4g_MI (IPR003891) - T[595-711] 18.096 |
| SMART |
Initiation_fac_eIF4g_MI (IPR003891) - T[596-702] 7.1E-16 |
| Pfam |
Initiation_fac_eIF4g_MI (IPR003891) - T[596-701] 2.7E-18 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NOM1_HUMAN | 34.559 % | 405 | 5.94E-129 |
