Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Cisavi.CG.ENS81.R54....'
  2. Clone 'cien202569'
  3. Clone 'cien203640'
  4. Transcript 'Haaura.CG.MTP2014.S7...'
  5. Transcript 'Haaura.CG.MTP2014.S5...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S5256.g10883.01.t

Possible name(s)

XPO1

Location

S5256 [230 / 4,190]

Sequences

Amino acid sequence

Length: 472

>Haaura.CG.MTP2014.S5256.g10883.01.p
IVSDLLGLCEQKRGKDNKAIIASNIMYVVGQYPRFLRAHWRFLKTVVNKLFEFMHETHDG
VQDMACDTFIKIAQKCRRHFVQIQAGEVMPFIEEILNNISTIICDLQPQQVHTFYEAVGY
MISAQTDTNVQEHLIEKYMMLPNQVWDSIIQQATKNVDVLKDPATVKQLGSILKTNVRAC
KSVGHYFVLQLGRIYLDMLNVYKCLSENISAAIKQQGEGVMKQPLIRSMRTVKKETLKLI
SGWVSRSNDPDMVNENFIPPLLEAVLMDYQSNVPAAREPEVLSTIATIVHKLEGAITQEI
PQIFDAVFECTLEMINKDFEEFPEYRTNFFLLLQAVNNHCFPALLAIPPAQFKLVLDSII
WAFKHTMRNVADTGLNILHQLLQNILQEKQASQSFFQTYFTDILQHVFSVVTDTSHTAGL
TMHATILAYMFSLVEQGRIVVPLHPDASDNVAFVHEYVANLLKTAFPHLQE*

Nucleotide sequence

Length: 1,431

>Haaura.CG.MTP2014.S5256.g10883.01.t
ATTGTTTCAGATCTTCTTGGACTTTGCGAACAGAAACGAGGCAAAGATAATAAAGCGATT
ATCGCTTCAAACATCATGTATGTTGTCGGCCAATATCCCAGATTTCTCAGAGCTCACTGG
AGATTCCTGAAAACTGTTGTCAATAAATTGTTTGAGTTTATGCACGAGACACACGATGGC
GTGCAAGATATGGCTTGCGACACATTCATAAAAATCGCTCAGAAGTGCCGCCGTCATTTC
GTGCAGATACAAGCCGGGGAAGTGATGCCGTTTATTGAAGAAATCTTGAATAATATAAGC
ACGATTATATGTGATCTACAACCACAGCAGGTTCATACATTCTATGAAGCAGTCGGATAC
ATGATCAGTGCACAGACAGATACAAATGTTCAAGAACATTTGATTGAAAAATACATGATG
TTACCGAATCAAGTATGGGATAGTATCATACAACAAGCGACGAAAAACGTCGATGTATTG
AAAGATCCGGCGACTGTCAAACAACTAGGAAGTATTTTGAAAACAAATGTGAGAGCGTGT
AAAAGTGTCGGACATTACTTCGTGCTACAGCTCGGACGTATTTATCTCGATATGCTGAAC
GTTTACAAATGTTTGAGCGAGAATATCTCTGCTGCCATCAAGCAGCAAGGTGAAGGAGTT
ATGAAACAACCTTTGATACGAAGCATGCGAACAGTAAAGAAAGAAACATTAAAACTTATC
TCCGGATGGGTCAGTCGATCAAATGATCCGGATATGGTGAACGAGAATTTCATTCCACCT
CTGCTTGAAGCTGTATTAATGGATTATCAATCGAATGTTCCGGCAGCTCGAGAACCGGAA
GTTCTGAGTACAATAGCAACAATAGTTCATAAGTTAGAGGGAGCAATAACACAAGAAATA
CCGCAGATATTTGATGCTGTATTCGAATGTACGCTCGAAATGATCAACAAAGATTTTGAA
GAATTTCCAGAATACAGAACAAATTTCTTTTTATTATTACAAGCTGTCAACAATCACTGC
TTCCCTGCTCTTCTTGCTATTCCTCCTGCACAATTTAAACTTGTTCTCGATTCAATCATT
TGGGCTTTCAAGCATACAATGAGGAATGTCGCTGATACAGGTTTGAATATTCTTCATCAG
CTGTTGCAGAACATTTTGCAAGAAAAGCAAGCGTCGCAAAGTTTCTTTCAAACATACTTC
ACAGATATATTACAGCATGTGTTCAGTGTTGTTACAGATACTTCACATACTGCTGGTCTC
ACAATGCATGCAACCATCCTTGCATACATGTTCAGTTTGGTCGAGCAAGGACGTATCGTG
GTTCCACTACATCCAGATGCCTCTGACAACGTTGCATTCGTTCATGAATATGTCGCAAAT
TTATTAAAGACTGCTTTCCCACATCTTCAAGAGTAAGTTATTAATCATTTT

InterProScan

Gene3D
ARM-like (IPR011989) - T[1-184] 1.2E-84 - T[186-471] 2.3E-129
SUPERFAMILY
ARM-type_fold (IPR016024) - T[188-470] 3.63E-105
Pfam
CRM1_C_dom (IPR014877) - T[190-470] 2.9E-117
SMART
CRM1_C_dom (IPR014877) - T[190-471] 6.2E-169

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
XPO1_HUMAN 84.746 % 848 0