- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Haaura.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S50.g01237.01.t
Possible name(s)
MKRN1; MKRN2; MKRN3
Gene model
Location
S50 [108,578 / 110,630]
Amino acid sequence
Length: 349
>Haaura.CG.MTP2014.S50.g01237.01.p
MAQRNDTKATCSGYNRGMSLSTLDVSWADAAEFVPGRQYMPRVTSSYSNITKKSIPVEST
NESSDTSTLLCPYYMVGNCRYGEECVYIHGTMCDMCGLNILHPTDILQEMKHKEECLDSH
EEDMKESFSIAQSSEITCGICMDQVWQKGQRKFGILENCSHAFCLDCIRKWRCAKSFNNT
VVKACPQCRVPSSFVTPSETWVEDPEEKKRLITGYKKHLSSKSCKHFSEGKGKCPFGVNC
FYRHSYPNGDLQDRTKIPKRVRNADGEQEIYESALLWDFFLDRDNNVDLDLDDDLDFCDI
VYLLGQNSSLDDEDDDLTLITILCHLFQSYYNGSISNVLCCILLYFSI*
Nucleotide sequence
Length: 1,214
>Haaura.CG.MTP2014.S50.g01237.01.t
TATTTCCGCTTATTCATAGATACACATACGACCGAACCGTAAGTTTTTGATCGTAATTTA
GTTGTCGCGCCCCTTTTGGCATTTTGCTAATTGCGGAACAAAGAAAAAGCGACGACTAGC
AATAATATGGCACAACGCAATGATACAAAAGCGACTTGCAGTGGGTACAACCGCGGGATG
AGCTTAAGCACCCTCGACGTCAGCTGGGCAGATGCTGCTGAGTTTGTACCAGGAAGGCAA
TATATGCCAAGAGTAACATCTTCCTACAGCAACATAACAAAGAAATCAATACCTGTCGAG
TCCACTAATGAAAGTTCTGACACTTCCACTCTACTGTGTCCATATTACATGGTTGGAAAT
TGCAGATATGGAGAAGAATGCGTGTACATCCATGGAACAATGTGTGACATGTGTGGGCTC
AACATCCTGCATCCGACTGACATTTTGCAAGAAATGAAACATAAAGAGGAGTGTTTGGAT
AGCCACGAGGAAGATATGAAGGAGTCCTTCAGTATTGCGCAAAGCAGTGAAATAACATGT
GGAATATGCATGGACCAGGTGTGGCAGAAAGGGCAGCGAAAGTTTGGCATACTTGAAAAC
TGTAGCCATGCTTTTTGCCTCGACTGCATACGCAAGTGGAGATGTGCAAAAAGTTTTAAT
AATACAGTTGTCAAAGCCTGCCCACAGTGCAGAGTACCATCTTCGTTTGTTACGCCGAGC
GAAACCTGGGTTGAAGATCCTGAAGAAAAAAAGAGATTAATAACTGGATACAAAAAACAT
CTATCTTCAAAATCTTGCAAGCACTTCAGTGAAGGCAAAGGAAAATGCCCATTCGGAGTG
AACTGCTTTTATCGACATTCTTACCCCAACGGGGATCTCCAAGATCGAACCAAGATACCG
AAGAGGGTTAGAAATGCTGACGGCGAACAGGAGATTTATGAATCTGCTCTTCTCTGGGAT
TTCTTCCTCGACCGAGACAACAATGTAGATTTAGACCTTGACGACGATCTAGACTTTTGC
GATATCGTGTACTTGCTTGGTCAGAATTCCAGTTTGGATGATGAAGATGACGACCTCACA
CTCATTACCATACTATGCCACTTATTCCAATCGTATTATAATGGATCAATATCGAACGTG
TTGTGTTGTATTCTACTGTATTTCTCTATTTAAGCGCCGGATTTTACTCTTCAATTCACA
CTTCATTAGGCTAA
| SMART |
Znf_CCCH (IPR000571) - T[65-91] 5.0E-5 - T[220-246] 0.41 |
| SUPERFAMILY |
Znf_CCCH_sf (IPR036855) - T[65-90] 3.66E-6 |
| ProSiteProfiles |
Znf_CCCH (IPR000571) - T[65-92] 13.582 - T[219-247] 13.61 |
| Pfam |
Znf_CCCH (IPR000571) - T[69-90] 1.1E-6 |
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[113-218] 3.9E-11 |
| Pfam |
Znf_RING (IPR001841) - T[137-189] 1.6E-6 |
| SMART |
Znf_RING (IPR001841) - T[138-188] 6.1E-6 |
| ProSiteProfiles |
Znf_RING (IPR001841) - T[138-189] 12.061 |
| ProSitePatterns |
Znf_RING_CS (IPR017907) - T[159-168] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MKRN1_HUMAN | 44.964 % | 271 | 1.47E-87 |
| MKRN4_HUMAN | 45.704 % | 276 | 1.64E-89 |
| MKRN2_HUMAN | 42.529 % | 238 | 1.88E-75 |