- Clone 'ma206l05' >
- Transcript 'Haaura.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S50.g01219.01.t
Possible name(s)
AHI1; WDR44; WDR5
Gene model
Location
S50 [29,203 / 37,124]
Amino acid sequence
Length: 877
>Haaura.CG.MTP2014.S50.g01219.01.p
MESSSDSDADFFDAHESVSESPRAPKKSLVADRIEDNATEPTVFQPDIQSLPVIQPSDQE
VDVLDAAVPLSSFTAIVANESAINETSGNEAPSECETDTNLSLSATQPPDIIVCVQERPT
NLPGIRQVNVDVPNGDEVAFAKKSKDDHKPAVKMKVPPPRPPPPPSRTLMQKRYSNKLKP
ERPPHLSVFDEGLLTPNSTVENLTREFTEALNKASNSELKSSDEPDGSNLKLKVEHAETQ
IPSTSGRLHDNSDLHDGSNITKKLSKQTSVISTGPQKEEEILSSVIVRNLDTGETMPLSA
AAEQVSQCLNPLALQIMSRTKEFSYAGSSSNSLSGHEKAQGLVGLPPEIEDLSGDDTISI
GSGDIEIGNKLGHRKTNSNGKRMKAKSKRLKKMLGKGVSKVKSVAEAQVERAVQKVKQVK
GEDTLNVSSDEDSSELISSSNIKVKVSSSNKGPHKFIHSKVVQDIAVHVGAVWCMKFSHC
GRLLATAGQDNVIWVWVLKHYYTYFNEMRNKYTTKEEDIFPSSSHHPLDMLSTSSFKSEE
NISQSSKVNSQDSLDIEDDDAPFRQVPFSSYVGHSSDVLDLAWSKNFFILSSSMDKTVRL
WHISRKECLCCFQHIDFVTAIAFHPRDDRYFLSGSLDSKLRLWNIPDKKVALWNEVSPNA
SSAFSSSSTSGVLITTVNFCENGKFAVCGTYDGRCIFFDTEHLKYHTQIHVRSSRGRNTK
GRKVTGIEPLPSEHKILVTSNDSRVRLYDLRDLSLVCKYKGLTNLSSQIKASFSPDCKYI
ISGSEDKYVYIWNTNLPQDVTKLSSFRRDRNDAWECIKAHNAVVTCAVFAPQPHLLRPNS
SDSKEVPQASKKKAAFESNIFITADFSGVIKIIVSE*
Nucleotide sequence
Length: 2,631
>Haaura.CG.MTP2014.S50.g01219.01.t
ATGGAGTCTTCCAGCGACAGTGATGCAGATTTTTTTGACGCTCACGAAAGTGTTTCCGAA
TCTCCAAGAGCTCCGAAAAAGTCCCTAGTTGCAGACAGGATCGAGGACAATGCAACTGAA
CCTACAGTCTTTCAACCTGATATTCAAAGCCTTCCAGTCATACAGCCATCAGATCAAGAA
GTAGATGTGCTCGATGCTGCGGTTCCATTGTCATCCTTCACAGCCATTGTGGCAAATGAA
TCAGCGATTAATGAAACGTCAGGAAATGAAGCACCTTCTGAATGCGAAACTGACACAAAT
TTATCTCTATCAGCAACTCAGCCACCTGACATCATCGTTTGTGTGCAAGAACGTCCAACA
AATTTACCTGGAATTCGACAAGTTAATGTGGACGTGCCCAATGGTGATGAAGTGGCCTTT
GCCAAAAAGTCGAAGGATGATCATAAACCTGCCGTTAAAATGAAGGTCCCGCCACCAAGA
CCACCACCTCCACCCAGTCGTACTCTCATGCAAAAGAGATATTCTAATAAACTCAAACCA
GAAAGGCCACCACATTTGAGTGTTTTTGATGAAGGTCTTCTCACTCCAAACTCAACGGTT
GAAAATCTGACAAGAGAGTTTACAGAAGCTTTGAATAAGGCATCGAACAGTGAACTGAAG
AGTTCTGATGAACCAGATGGAAGTAATTTAAAACTCAAAGTTGAACATGCAGAAACACAG
ATCCCGTCCACTTCCGGTAGACTGCATGATAATTCAGATTTACATGATGGTTCGAATATT
ACTAAAAAGTTGAGCAAGCAAACTTCTGTTATTTCTACAGGTCCCCAAAAGGAAGAGGAA
ATTTTGTCCAGTGTCATCGTAAGAAATTTGGATACTGGGGAAACAATGCCACTCAGTGCA
GCTGCTGAACAGGTATCCCAATGTTTGAACCCTCTTGCTTTACAAATCATGAGTCGTACT
AAAGAGTTTTCATACGCCGGATCGTCAAGCAACTCGCTATCTGGACACGAAAAGGCGCAG
GGACTTGTGGGTCTCCCTCCGGAAATCGAAGATCTGTCTGGTGATGACACGATATCAATA
GGCAGCGGTGATATTGAAATCGGCAATAAACTTGGCCACAGAAAAACCAATAGCAATGGG
AAAAGAATGAAAGCAAAGAGTAAGAGATTGAAAAAGATGTTGGGTAAAGGTGTCAGTAAA
GTAAAAAGTGTGGCTGAAGCTCAAGTCGAGAGAGCTGTACAAAAGGTGAAGCAGGTTAAA
GGAGAAGATACTCTCAATGTATCAAGTGATGAAGATTCTTCCGAGTTGATTTCATCATCC
AACATCAAAGTAAAGGTGTCTTCAAGTAACAAAGGACCACATAAATTTATTCATTCCAAA
GTAGTACAAGATATAGCGGTACATGTGGGTGCTGTATGGTGCATGAAATTCAGTCACTGT
GGTAGATTGTTAGCAACGGCTGGCCAAGATAATGTAATATGGGTTTGGGTGCTCAAGCAT
TACTATACATACTTCAATGAGATGAGAAATAAATATACAACTAAAGAAGAAGATATTTTC
CCTTCTTCATCACATCACCCTCTGGACATGTTAAGTACTTCCAGTTTCAAGTCAGAAGAA
AACATAAGTCAATCGTCAAAAGTAAATTCGCAAGACAGTCTCGATATTGAAGATGATGAT
GCTCCTTTTCGTCAGGTTCCGTTTTCATCCTATGTTGGTCATTCTTCAGATGTGCTTGAC
CTCGCATGGTCAAAAAATTTTTTCATATTGTCTTCCTCCATGGACAAGACTGTTCGTCTA
TGGCACATATCACGGAAAGAGTGTCTATGTTGTTTCCAACATATTGACTTTGTCACTGCA
ATTGCCTTCCATCCTAGGGACGATAGATATTTCTTGAGTGGTTCTCTTGACAGCAAGCTG
CGTTTGTGGAACATTCCTGACAAGAAAGTTGCCCTGTGGAATGAAGTTTCTCCTAATGCA
TCATCTGCCTTTTCTTCTAGTTCTACAAGTGGAGTCCTTATTACTACAGTAAACTTTTGT
GAAAATGGAAAATTTGCTGTCTGTGGCACTTACGATGGACGATGTATATTTTTTGACACG
GAGCATTTGAAATATCACACTCAAATCCATGTCCGTTCTTCTCGGGGCCGAAACACAAAG
GGAAGAAAAGTGACGGGTATTGAACCGTTACCTAGTGAACATAAAATCCTGGTAACATCA
AACGATTCTAGAGTTCGCCTTTATGATCTCCGTGATTTGTCATTGGTTTGCAAATACAAA
GGATTGACTAACTTGAGCAGTCAGATTAAAGCAAGTTTTAGTCCGGACTGTAAGTACATC
ATAAGTGGCTCGGAGGACAAGTATGTCTATATTTGGAACACAAACCTACCGCAGGACGTG
ACAAAATTATCTTCATTTCGCAGAGATCGTAATGACGCTTGGGAATGCATAAAAGCACAC
AACGCAGTGGTCACTTGTGCAGTGTTTGCTCCACAACCACACTTACTCCGTCCTAACTCT
TCAGACAGTAAGGAGGTACCTCAGGCCTCTAAAAAGAAAGCCGCTTTTGAGTCGAATATT
TTTATCACTGCGGATTTCAGCGGGGTCATTAAAATAATCGTCAGTGAATAG
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[457-500] 3.36E-52 - T[565-842] 3.36E-52 |
| SMART |
WD40_repeat (IPR001680) - T[458-497] 3.2E-6 - T[564-602] 1.3E-6 - T[605-644] 7.0E-8 - T[659-699] 12.0 - T[707-749] 18.0 - T[752-793] 0.01 - T[810-874] 410.0 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[465-506] 9.257 - T[571-802] 18.51 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[465-496] 10.241 - T[571-604] 11.912 - T[611-645] 11.143 - T[772-802] 10.007 |
| Pfam |
WD40_repeat (IPR001680) - T[467-496] 0.011 - T[567-601] 1.0E-4 - T[607-644] 0.0056 - T[769-793] 0.0017 |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[589-603] 5.2E-5 - T[631-645] 5.2E-5 - T[780-794] 5.2E-5 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[780-794] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| WDR5_HUMAN | 29.06 % | 87.4 | 1.88E-18 |
| WDR5B_HUMAN | 26.74 % | 81.6 | 1.4E-16 |
| WDR44_HUMAN | 52.54 % | 624 | 0 |